RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PDLIM7Q9NR12 457 aa17.02■□□□□ 0.32
CD9-210ENST00000543916 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.02■□□□□ 0.32
CD9-210ENST00000543916 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
CD9-210ENST00000543916 ERAP1Q9NZ08 941 aa17.02■□□□□ 0.32
CD9-210ENST00000543916 GTF2IRD1Q9UHL9 959 aa17.02■□□□□ 0.32
CD9-210ENST00000543916 IGSF9BQ9UPX0 1349 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 TRIP12Q14669 1992 aaPredicted RBP17.01■□□□□ 0.31
CD9-210ENST00000543916 CLTBP09497 229 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 SMIM10L2AP0DMW4 78 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 SMIM10L2BP0DMW5 78 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 SFNP31947 248 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 TXKP42681 527 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 STAT5BP51692 787 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 UGCGQ16739 394 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 FAM160B1Q5W0V3 765 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 PLPPR4Q7Z2D5 763 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 RDM1Q8NG50 284 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 TTC12Q9H892 705 aaPredicted RBP17.01■□□□□ 0.31
CD9-210ENST00000543916 ZNF302Q9NR11 478 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 GABBR1Q9UBS5 961 aa17.01■□□□□ 0.31
CD9-210ENST00000543916 ZMYND8Q9ULU4 1186 aaPredicted RBP17.01■□□□□ 0.31
CD9-210ENST00000543916 TRIM43BA6NCK2 446 aa17■□□□□ 0.31
CD9-210ENST00000543916 TLR3O15455 904 aaKnown RBP17■□□□□ 0.31
CD9-210ENST00000543916 SYN1P17600 705 aa17■□□□□ 0.31
CD9-210ENST00000543916 ATP4AP20648 1035 aa17■□□□□ 0.31
CD9-210ENST00000543916 HOXC8P31273 242 aa17■□□□□ 0.31
CD9-210ENST00000543916 ZNF200P98182 395 aaPredicted RBP17■□□□□ 0.31
CD9-210ENST00000543916 PTGDRQ13258 359 aa17■□□□□ 0.31
CD9-210ENST00000543916 PKP1Q13835 747 aa17■□□□□ 0.31
CD9-210ENST00000543916 PLCB4Q15147 1175 aa17■□□□□ 0.31
CD9-210ENST00000543916 NCAPH2Q6IBW4 605 aa17■□□□□ 0.31
CD9-210ENST00000543916 PDXDC2PQ6P474 469 aa17■□□□□ 0.31
CD9-210ENST00000543916 FAM173BQ6P4H8 233 aa17■□□□□ 0.31
CD9-210ENST00000543916 TRIM43Q96BQ3 446 aaPredicted RBP17■□□□□ 0.31
CD9-210ENST00000543916 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
CD9-210ENST00000543916 TBX21Q9UL17 535 aa17■□□□□ 0.31
CD9-210ENST00000543916 PCDHA12Q9UN75 941 aa17■□□□□ 0.31
CD9-210ENST00000543916 MAFBQ9Y5Q3 323 aaPredicted RBP17■□□□□ 0.31
CD9-210ENST00000543916 TANC1Q9C0D5 1861 aa16.99■□□□□ 0.31
CD9-210ENST00000543916 ZNF862O60290 1169 aa16.99■□□□□ 0.31
CD9-210ENST00000543916 PTGISQ16647 500 aa16.99■□□□□ 0.31
CD9-210ENST00000543916 FOXD4L5Q5VV16 416 aaPredicted RBP16.99■□□□□ 0.31
CD9-210ENST00000543916 FOXD4L4Q8WXT5 416 aaPredicted RBP16.99■□□□□ 0.31
CD9-210ENST00000543916 SETD4Q9NVD3 440 aa16.99■□□□□ 0.31
CD9-210ENST00000543916 NR2E3Q9Y5X4 410 aa16.99■□□□□ 0.31
CD9-210ENST00000543916 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 POTEB3A0JP26 581 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 C17orf102A2RUQ5 167 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 POTEMA6NI47 508 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 H0YGN5 161 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
CD9-210ENST00000543916 CYP2C9P11712 490 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 SLC26A2P50443 739 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 ADAM17P78536 824 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 POTEBQ6S5H4 581 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 BANK1Q8NDB2 785 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 LMBR1Q8WVP7 490 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
CD9-210ENST00000543916 ZSCAN16Q9H4T2 348 aaPredicted RBP16.98■□□□□ 0.31
CD9-210ENST00000543916 TMEM39AQ9NV64 488 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 TRPC6Q9Y210 931 aa16.98■□□□□ 0.31
CD9-210ENST00000543916 KAT6AQ92794 2004 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 KIAA0355O15063 1070 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 INSRRP14616 1297 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 ITGB8P26012 769 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 TECP42680 631 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
CD9-210ENST00000543916 PRKCEQ02156 737 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 PPFIA1Q13136 1202 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 EPHA7Q15375 998 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 GRIK4Q16099 956 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 CKAP2LQ8IYA6 745 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 ATP8B4Q8TF62 1192 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 TRAPPC12Q8WVT3 735 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 DHX38Q92620 1227 aaKnown RBP16.97■□□□□ 0.31
CD9-210ENST00000543916 NOD1Q9Y239 953 aa16.97■□□□□ 0.31
CD9-210ENST00000543916 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 NRCAMQ92823 1304 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 LAD1O00515 517 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 TREHO43280 583 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 F13A1P00488 732 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
CD9-210ENST00000543916 PRPHP41219 470 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 IL17AQ16552 155 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 MARCH8Q5T0T0 291 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 TRMT1LQ7Z2T5 733 aaKnown RBP16.96■□□□□ 0.31
CD9-210ENST00000543916 ATP6V0A1Q93050 837 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 WNT8BQ93098 351 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 ZBTB10Q96DT7 871 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 DYDC2Q96IM9 177 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 EIF2AK1Q9BQI3 630 aaKnown RBP16.96■□□□□ 0.31
CD9-210ENST00000543916 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
CD9-210ENST00000543916 RGL1Q9NZL6 768 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 WRAP73Q9P2S5 460 aaPredicted RBP16.96■□□□□ 0.31
CD9-210ENST00000543916 PRKAG2Q9UGJ0 569 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 CLIC4Q9Y696 253 aa16.96■□□□□ 0.31
CD9-210ENST00000543916 ZBTB42B2RXF5 422 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 HBP1O60381 514 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms