RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	PRR12	Q9ULL5	1215 aa		12.48	□□□□□ -0.41
LDHA-222	ENST00000543695	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.48	□□□□□ -0.41
LDHA-222	ENST00000543695	PARP14	Q460N5	1801 aa		12.48	□□□□□ -0.41
LDHA-222	ENST00000543695	PES1	O00541	588 aa	Known RBP	12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	CXCL11	O14625	94 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	NDUFA10	O95299	355 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	PLA2G4B	P0C869	781 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	IDE	P14735	1019 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	H2AFX	P16104	143 aa	Predicted RBP	12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	ARHGAP25	P42331	645 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	SPIRE1	Q08AE8	756 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	KIF22	Q14807	665 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	VWA3B	Q502W6	1294 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	ARHGAP29	Q52LW3	1261 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	FAM26F	Q5R3K3	315 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	ACRBP	Q8NEB7	543 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	CEP63	Q96MT8	703 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	P2RX7	Q99572	595 aa	Known RBP	12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	CARD6	Q9BX69	1037 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	PICK1	Q9NRD5	415 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	ZBTB21	Q9ULJ3	1066 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	KIAA1024	Q9UPX6	916 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	KCNH4	Q9UQ05	1017 aa		12.47	□□□□□ -0.41
LDHA-222	ENST00000543695	DOCK1	Q14185	1865 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695		A0A1W2PRG0	241 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	FRMD3	A2A2Y4	597 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	PHF20L1	A8MW92	1017 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695		E9PMD0	336 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	CYLC1	P35663	651 aa	Predicted RBP	12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	STAT2	P52630	851 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	KRT83	P78385	493 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	MAP3K10	Q02779	954 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	PPP2R3A	Q06190	1150 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	ERCC6L	Q2NKX8	1250 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	USH1G	Q495M9	461 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	ZCWPW2	Q504Y3	356 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	WDR59	Q6PJI9	974 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	LRRC55	Q6ZSA7	311 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	ANKRD23	Q86SG2	305 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	FAM160B2	Q86V87	743 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	GPBP1	Q86WP2	473 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	CCDC170	Q8IYT3	715 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	LRRN4CL	Q8ND94	238 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	CHURC1	Q8WUH1	139 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	UBXN4	Q92575	508 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	HPS3	Q969F9	1004 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	LENG9	Q96B70	501 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	EDEM3	Q9BZQ6	932 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	RANBP17	Q9H2T7	1088 aa	Known RBP	12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	HAUS4	Q9H6D7	363 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	SH2D4A	Q9H788	454 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	EHMT1	Q9H9B1	1298 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	LZTFL1	Q9NQ48	299 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.46	□□□□□ -0.41	3e-8	■□□□□ 10.1
LDHA-222	ENST00000543695	PCDHA2	Q9Y5H9	948 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	ZHX2	Q9Y6X8	837 aa		12.46	□□□□□ -0.41
LDHA-222	ENST00000543695		V9GYY5	206 aa	Predicted RBP	12.46	□□□□□ -0.41
LDHA-222	ENST00000543695	POTEB3	A0JP26	581 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	OPLAH	O14841	1288 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	CTNND1	O60716	968 aa	Known RBP	12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	MED24	O75448	989 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	GNA14	O95837	355 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	CYP11B2	P19099	503 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	TRIM21	P19474	475 aa	Known RBP	12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	RPA1	P27694	616 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	HNRNPH3	P31942	346 aa	Known RBP	12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	SLC12A3	P55017	1021 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	TUBB4B	P68371	445 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	FKBP3	Q00688	224 aa	Known RBP	12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	PRR16	Q569H4	304 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	FBXO38	Q6PIJ6	1188 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	POTEB	Q6S5H4	581 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	SCYL3	Q8IZE3	742 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	CHP1	Q99653	195 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	SLF1	Q9BQI6	1058 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	NDST4	Q9H3R1	872 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	VCPKMT	Q9H867	229 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	OGFR	Q9NZT2	677 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	CDC23	Q9UJX2	597 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	SIK3	Q9Y2K2	1263 aa		12.45	□□□□□ -0.42
LDHA-222	ENST00000543695	CTAGE9	A4FU28	777 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	EIF3CL	B5ME19	914 aa	Known RBP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	PDHX	O00330	501 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	MSH4	O15457	936 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	GNRH1	P01148	92 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	SSB	P05455	408 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	PTPRA	P18433	802 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	MARS	P56192	900 aa	Known RBP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	SNAP25	P60880	206 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	ZNF569	Q5MCW4	686 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	RSRC2	Q7L4I2	434 aa	Known RBP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	FASTKD5	Q7L8L6	764 aa	Known RBP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	CCDC84	Q86UT8	332 aa	Predicted RBP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	SLC35F6	Q8N357	371 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	CEP112	Q8N8E3	955 aa		12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	SYT2	Q8N9I0	419 aa	Predicted RBP	12.44	□□□□□ -0.42
LDHA-222	ENST00000543695	GJA10	Q969M2	543 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms