RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	ZBTB10	Q96DT7	871 aa		12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	TMX3	Q96JJ7	454 aa		12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	PCYT2	Q99447	389 aa		12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	LLPH	Q9BRT6	129 aa	Known RBP	12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	TEKT3	Q9BXF9	490 aa		12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	GABBR1	Q9UBS5	961 aa		12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	TRIOBP	Q9H2D6	2365 aa		12.5	□□□□□ -0.41
DDB1-222	ENST00000543627	POTEB3	A0JP26	581 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	DHX15	O43143	795 aa	Known RBP	12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	PSAP	P07602	524 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	INSRR	P14616	1297 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	SELP	P16109	830 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	KRT76	Q01546	638 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	PLCB4	Q15147	1175 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627		Q4G0T1	1027 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	ZNF618	Q5T7W0	954 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	POTEB	Q6S5H4	581 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	ABHD15	Q6UXT9	468 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	LRRC8D	Q7L1W4	858 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	FAM177A1	Q8N128	213 aa	Predicted RBP	12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	CAGE1	Q8TC20	777 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	LMBR1	Q8WVP7	490 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	TRAPPC12	Q8WVT3	735 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	TNPO1	Q92973	898 aa	Known RBP	12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	DISC1	Q9NRI5	854 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	PCDHA10	Q9Y5I2	948 aa		12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	RANBP2	P49792	3224 aa	Known RBP	12.49	□□□□□ -0.41
DDB1-222	ENST00000543627	LTBP2	Q14767	1821 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	NRCAM	Q92823	1304 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	SLC37A4	O43826	429 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	LGR5	O75473	907 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	BAG4	O95429	457 aa	Known RBP	12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	MCM2	P49736	904 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	MCTP1	Q6DN14	999 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	PLPPR4	Q7Z2D5	763 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	MIER3	Q7Z3K6	550 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	AFAP1L1	Q8TED9	768 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	LENG9	Q96B70	501 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	FAM161B	Q96MY7	647 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	CTAGE1	Q96RT6	745 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	MTIF3	Q9H2K0	278 aa	Known RBP	12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	UNC45A	Q9H3U1	944 aa		12.48	□□□□□ -0.41
DDB1-222	ENST00000543627	TRIP12	Q14669	1992 aa	Predicted RBP	12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	EMSY	Q7Z589	1322 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	GRXCR1	A8MXD5	290 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	WDR64	B1ANS9	1081 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	RSPH10B2	B2RC85	870 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	PITPNM1	O00562	1244 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	ATG7	O95352	703 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	RSPH10B	P0C881	870 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	ACTN1	P12814	892 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	TMEM62	Q0P6H9	643 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	LRIT3	Q3SXY7	679 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	RUFY4	Q6ZNE9	571 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	RSPH3	Q86UC2	560 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	SERINC5	Q86VE9	423 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	POTED	Q86YR6	584 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	DNAJB3	Q8WWF6	145 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	SLC5A5	Q92911	643 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	RIT2	Q99578	217 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	NAP1L4	Q99733	375 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	FOXD4L1	Q9NU39	408 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	TUBE1	Q9UJT0	475 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	SMC3	Q9UQE7	1217 aa		12.47	□□□□□ -0.41
DDB1-222	ENST00000543627	KAT6A	Q92794	2004 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	RRN3P2	A6NIE6	340 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627		H3BQV1	296 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	HBP1	O60381	514 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	GCFC2	P16383	781 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	CYP3A7	P24462	503 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	KLRC1	P26715	233 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	GJB2	P29033	226 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	MCM7	P33993	719 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	ZNF174	Q15697	407 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	NCAPH2	Q6IBW4	605 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627		Q7L0L9	218 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	METTL13	Q8N6R0	699 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	BANK1	Q8NDB2	785 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	PPP1R16B	Q96T49	567 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	GINS2	Q9Y248	185 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	KIF3A	Q9Y496	699 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	SLC4A7	Q9Y6M7	1214 aa		12.46	□□□□□ -0.41
DDB1-222	ENST00000543627	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	DDX11L8	A8MPP1	907 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	NBN	O60934	754 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	PSMD10	O75832	226 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	IBSP	P21815	317 aa	Predicted RBP	12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	RFC2	P35250	354 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	TXK	P42681	527 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	JAK3	P52333	1124 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	CALCRL	Q16602	461 aa		12.45	□□□□□ -0.42
DDB1-222	ENST00000543627	TRIM71	Q2Q1W2	868 aa	Known RBP	12.45	□□□□□ -0.42

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