RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TELO2Q9Y4R8 837 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 CLIC4Q9Y696 253 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 MYH9P35579 1960 aaKnown RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 EMSYQ7Z589 1322 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 POTEB3A0JP26 581 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 C17orf102A2RUQ5 167 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 POTEMA6NI47 508 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 DDX11L8A8MPP1 907 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 EVI5O60447 810 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 BRD1O95696 1058 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 F2P00734 622 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 P4HBP07237 508 aaKnown RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 GNAT1P11488 350 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 COL6A1P12109 1028 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 MARCKSP29966 332 aaPredicted RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 PRPHP41219 470 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 MNX1P50219 401 aaPredicted RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 SLC26A2P50443 739 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 ATP2C1P98194 919 aaPredicted RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 CYP4A11Q02928 519 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 PPP2R5CQ13362 524 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 EPHA7Q15375 998 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 LRRC26Q2I0M4 334 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 TRIM60Q495X7 471 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 KRT79Q5XKE5 535 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 HAUS3Q68CZ6 603 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 POTEBQ6S5H4 581 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 PLPPR4Q7Z2D5 763 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 CCDC60Q8IWA6 550 aaPredicted RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 TPH2Q8IWU9 490 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 C7orf61Q8IZ16 206 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 DYDC2Q96IM9 177 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 CDK5RAP3Q96JB5 506 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 FAM167AQ96KS9 214 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 IPO9Q96P70 1041 aaKnown RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 MTMR9Q96QG7 549 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 USP28Q96RU2 1077 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 C16orf70Q9BSU1 422 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 SEZ6LQ9BYH1 1024 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 FTOQ9C0B1 505 aaKnown RBP eCLIP7.09□□□□□ -1.27
LTBR-212ENST00000543542 NRBP2Q9NSY0 501 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 HDAC6Q9UBN7 1215 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 SEPT9Q9UHD8 586 aaPredicted RBP7.09□□□□□ -1.27
LTBR-212ENST00000543542 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 CFAP45Q9UL16 551 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 STK24Q9Y6E0 443 aa7.09□□□□□ -1.27
LTBR-212ENST00000543542 KAT6AQ92794 2004 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 DNAH12Q6ZR08 3092 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 WDR81Q562E7 1941 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 EML1O00423 815 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 HBP1O60381 514 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 LGR5O75473 907 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 ATG7O95352 703 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 OATP04181 439 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 SMIM10L2AP0DMW4 78 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 SMIM10L2BP0DMW5 78 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 HOXD8P13378 290 aaPredicted RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 TXLNAP40222 546 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 CCT6AP40227 531 aaKnown RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 QARSP47897 775 aaKnown RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 FXR2P51116 673 aaKnown RBP eCLIP7.08□□□□□ -1.28
LTBR-212ENST00000543542 PSMC5P62195 406 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 KRT85P78386 507 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 PRKCEQ02156 737 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 TLE2Q04725 743 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 DNM1Q05193 864 aaKnown RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 PTPN11Q06124 597 aaPredicted RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 PPFIA1Q13136 1202 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 CTTNQ14247 550 aaKnown RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 PLCB4Q15147 1175 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 GRIK4Q16099 956 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 PTGISQ16647 500 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 MTERF2Q49AM1 385 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 TPRNQ4KMQ1 711 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 ARL6IP4Q66PJ3 421 aaKnown RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 NFRKBQ6P4R8 1299 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 OTUD6AQ7L8S5 288 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 CCDC155Q8N6L0 562 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 C4orf32Q8N8J7 132 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 NEK9Q8TD19 979 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 AFAP1L1Q8TED9 768 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 BBXQ8WY36 941 aaPredicted RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 KAT2BQ92831 832 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 EIF2AK1Q9BQI3 630 aaKnown RBP7.08□□□□□ -1.28
LTBR-212ENST00000543542 LXNQ9BS40 222 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 RNPEPQ9H4A4 650 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 ZSWIM4Q9H7M6 989 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 TMEM39AQ9NV64 488 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 SETD4Q9NVD3 440 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 CHMP5Q9NZZ3 219 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 NR2E3Q9Y5X4 410 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 BRCA2P51587 3418 aa7.08□□□□□ -1.28
LTBR-212ENST00000543542 NRCAMQ92823 1304 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 IGSF9BQ9UPX0 1349 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 IGKV6D-21A0A0A0MT36 114 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 RRN3P2A6NIE6 340 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 HAS3O00219 553 aa7.07□□□□□ -1.28
LTBR-212ENST00000543542 SPTLC2O15270 562 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms