RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 TDP2O95551 362 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 MMP1P03956 469 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 GCFC2P16383 781 aaKnown RBP18.41■□□□□ 0.54
CIT-212ENST00000543239 MARK3P27448 753 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 PPFIA1Q13136 1202 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 MIS18BP1Q6P0N0 1132 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 NEK8Q86SG6 692 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 SLC5A5Q92911 643 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 VWCEQ96DN2 955 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 SLC34A2O95436 690 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 SMAD3P84022 425 aaKnown RBP18.4■□□□□ 0.54
CIT-212ENST00000543239 GRIK4Q16099 956 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 KRT40Q6A162 431 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 PPP4R3AQ6IN85 833 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 PIK3AP1Q6ZUJ8 805 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 TNFRSF25Q93038 417 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 WNT8BQ93098 351 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 BACH2Q9BYV9 841 aa18.4■□□□□ 0.54
CIT-212ENST00000543239 MBLAC1A4D2B0 266 aaPredicted RBP18.39■□□□□ 0.53
CIT-212ENST00000543239 RRN3P2A6NIE6 340 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 BACH1O14867 736 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 GAS7O60861 476 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 MCM2P49736 904 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 NR5A1Q13285 461 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 LETM2Q2VYF4 491 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 LRCH2Q5VUJ6 765 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 DEFB128Q7Z7B8 93 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 CCDC60Q8IWA6 550 aaPredicted RBP18.39■□□□□ 0.53
CIT-212ENST00000543239 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
CIT-212ENST00000543239 UIMC1Q96RL1 719 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 TEKT3Q9BXF9 490 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 ZNF302Q9NR11 478 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 DDX25Q9UHL0 483 aaKnown RBP18.39■□□□□ 0.53
CIT-212ENST00000543239 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 PCDHA10Q9Y5I2 948 aa18.39■□□□□ 0.53
CIT-212ENST00000543239 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.38■□□□□ 0.53
CIT-212ENST00000543239 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.38■□□□□ 0.53
CIT-212ENST00000543239 WDR64B1ANS9 1081 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 PSMD10O75832 226 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 PSAPP07602 524 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 ACTN1P12814 892 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 SFNP31947 248 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 THPOP40225 353 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 RPAINQ86UA6 219 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 ETNPPLQ8TBG4 499 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 TUBE1Q9UJT0 475 aa18.38■□□□□ 0.53
CIT-212ENST00000543239 MAFBQ9Y5Q3 323 aaPredicted RBP18.38■□□□□ 0.53
CIT-212ENST00000543239 TRIP12Q14669 1992 aaPredicted RBP18.38■□□□□ 0.53
CIT-212ENST00000543239 SCN5AQ14524 2016 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 BTBD18B2RXH4 712 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 CXCL10P02778 98 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 RPLP2P05387 115 aaKnown RBP18.37■□□□□ 0.53
CIT-212ENST00000543239 INSRRP14616 1297 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 JAK3P52333 1124 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 GPNMBQ14956 572 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIT-212ENST00000543239 EARS2Q5JPH6 523 aaKnown RBP18.37■□□□□ 0.53
CIT-212ENST00000543239 SWSAP1Q6NVH7 229 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 RDM1Q8NG50 284 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 C8orf76Q96K31 380 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 FTOQ9C0B1 505 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIT-212ENST00000543239 DISC1Q9NRI5 854 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 SAMM50Q9Y512 469 aa18.37■□□□□ 0.53
CIT-212ENST00000543239 RSPH10B2B2RC85 870 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 TBX3O15119 743 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 SLC37A4O43826 429 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 HBP1O60381 514 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
CIT-212ENST00000543239 NBNO60934 754 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 COL1A2P08123 1366 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 RSPH10BP0C881 870 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 FOSBP53539 338 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 FAM109BQ6ICB4 259 aaPredicted RBP18.36■□□□□ 0.53
CIT-212ENST00000543239 FAM20AQ96MK3 541 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 KCNMB3Q9NPA1 279 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
CIT-212ENST00000543239 IGSF9BQ9UPX0 1349 aa18.36■□□□□ 0.53
CIT-212ENST00000543239 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
CIT-212ENST00000543239 KAT6AQ92794 2004 aa18.35■□□□□ 0.53
CIT-212ENST00000543239 FAM205CA6NFA0 338 aa18.35■□□□□ 0.53
CIT-212ENST00000543239 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
CIT-212ENST00000543239 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
CIT-212ENST00000543239 B3GNT9Q6UX72 402 aa18.35■□□□□ 0.53
CIT-212ENST00000543239 RSPH3Q86UC2 560 aa18.35■□□□□ 0.53
CIT-212ENST00000543239 FBXO18Q8NFZ0 1043 aa18.35■□□□□ 0.53
CIT-212ENST00000543239 BBXQ8WY36 941 aaPredicted RBP18.35■□□□□ 0.53
CIT-212ENST00000543239 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms