RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TOP1P11387 765 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 VCAM1P19320 739 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 IRX3P78415 501 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 KLRC3Q07444 240 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 MOGSQ13724 837 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TAF1CQ15572 869 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 BRDTQ58F21 947 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TREML2Q5T2D2 321 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 IFIT1BQ5T764 474 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 WDR78Q5VTH9 848 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 IER5Q5VY09 327 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SLFN13Q68D06 897 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 GPAT2Q6NUI2 795 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 FIGNL1Q6PIW4 674 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ANKS3Q6ZW76 656 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 HS2ST1Q7LGA3 356 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 CHST3Q7LGC8 479 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TREML1Q86YW5 311 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 MB21D2Q8IYB1 491 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SPICE1Q8N0Z3 855 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 LRRC47Q8N1G4 583 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 GMCL1P1Q8NEA9 526 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 C12orf42Q96LP6 360 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 DMRTB1Q96MA1 342 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 JAKMIP1Q96N16 626 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 PARK7Q99497 189 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TMEM47Q9BQJ4 181 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 NIF3L1Q9GZT8 377 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 RPAP3Q9H6T3 665 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 KAT14Q9H8E8 782 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 UPF2Q9HAU5 1272 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ZFYVE28Q9HCC9 887 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ZCCHC17Q9NP64 241 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SAGE1Q9NXZ1 904 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ISY1Q9ULR0 285 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SLC45A1Q9Y2W3 748 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ATAD5Q96QE3 1844 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 WDR46O15213 610 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ZNF500O60304 480 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 VSIG8P0DPA2 414 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 HOXA7P31268 230 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SLC1A4P43007 532 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 EIF1AXP47813 144 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 NOVP48745 357 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 IDH3AP50213 366 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 WTAPQ15007 396 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ADCK5Q3MIX3 580 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TMEM67Q5HYA8 995 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 FAM26DQ5JW98 314 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 NFXL1Q6ZNB6 911 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 BTLAQ7Z6A9 289 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 ENAHQ8N8S7 591 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 SMCR8Q8TEV9 937 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 GTPBP3Q969Y2 492 aaKnown RBP5.91□□□□□ -1.46
CLIP1-217ENST00000543205 GMCL1Q96IK5 515 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 TMEM87BQ96K49 555 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 CEP63Q96MT8 703 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 MYH8P13535 1937 aa5.91□□□□□ -1.46
CLIP1-217ENST00000543205 LAMA4Q16363 1823 aa5.9□□□□□ -1.46
CLIP1-217ENST00000543205 DCDC2BA2VCK2 349 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ATXN7O15265 892 aaPredicted RBP5.9□□□□□ -1.47
CLIP1-217ENST00000543205 KLF4O43474 513 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 MICAL2O94851 1124 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 TBC1D8O95759 1140 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 NDUFB10O96000 172 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 CYP2C8P10632 490 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 POU3F3P20264 500 aaPredicted RBP5.9□□□□□ -1.47
CLIP1-217ENST00000543205 CASTP20810 708 aaKnown RBP5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ANTXR2P58335 489 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 CRHR2Q13324 411 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 KIAA1755Q5JYT7 1200 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 FAM83BQ5T0W9 1011 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 RCSD1Q6JBY9 416 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ALKBH2Q6NS38 261 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 CATSPERGQ6ZRH7 1159 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 VWA5B2Q8N398 1253 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 HNRNPLLQ8WVV9 542 aaKnown RBP5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ANKS1AQ92625 1134 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 CHMP4CQ96CF2 233 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 CEP89Q96ST8 783 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ZCCHC2Q9C0B9 1178 aaKnown RBP5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ASCC2Q9H1I8 757 aaPredicted RBP5.9□□□□□ -1.47
CLIP1-217ENST00000543205 ARNT2Q9HBZ2 717 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 WDR19Q8NEZ3 1342 aa5.9□□□□□ -1.47
CLIP1-217ENST00000543205 PHIPQ8WWQ0 1821 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 THSD7BQ9C0I4 1608 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 CCDC69A6NI79 296 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 IFRD1O00458 451 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-217ENST00000543205 KHNYNO15037 678 aaKnown RBP5.89□□□□□ -1.47
CLIP1-217ENST00000543205 ZBTB39O15060 712 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 TSPAN6O43657 245 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 FLOT1O75955 427 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 BMP3P12645 472 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 EXOSC10Q01780 885 aaKnown RBP5.89□□□□□ -1.47
CLIP1-217ENST00000543205 TYRO3Q06418 890 aa5.89□□□□□ -1.47
CLIP1-217ENST00000543205 IKQ13123 557 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-217ENST00000543205 COG2Q14746 738 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms