RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 RIOK1Q9BRS2 568 aaKnown RBP12.13□□□□□ -0.47
RFC5-209ENST00000543153 TMEM39AQ9NV64 488 aa12.13□□□□□ -0.47
RFC5-209ENST00000543153 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
RFC5-209ENST00000543153 PFASO15067 1338 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 ZNF76P36508 570 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 RAC1P63000 192 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 SNRPNP63162 240 aaKnown RBP12.12□□□□□ -0.47
RFC5-209ENST00000543153 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 SV2BQ7L1I2 683 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 TDHQ8IZJ6 230 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 SLC7A3Q8WY07 619 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 USP6NLQ92738 828 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 GDF15Q99988 308 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
RFC5-209ENST00000543153 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.47
RFC5-209ENST00000543153 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
RFC5-209ENST00000543153 FSCN2O14926 492 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 MSCO60682 206 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 CNMDO75829 334 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 TCF3P15923 654 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 CYP2C19P33261 490 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 C19orf57Q0VDD7 668 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
RFC5-209ENST00000543153 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 LINC00114Q6XXX2 140 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 LCORLQ8N3X6 602 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 RNF34Q969K3 372 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 LBHD1Q9BQE6 289 aaPredicted RBP12.11□□□□□ -0.47
RFC5-209ENST00000543153 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
RFC5-209ENST00000543153 SOX17Q9H6I2 414 aaPredicted RBP12.11□□□□□ -0.47
RFC5-209ENST00000543153 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 NOP53Q9NZM5 478 aaKnown RBP12.11□□□□□ -0.47
RFC5-209ENST00000543153 BTBD7Q9P203 1132 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 SAMM50Q9Y512 469 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
RFC5-209ENST00000543153 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 MYH1P12882 1939 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 FBXO24O75426 580 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 FLOT1O75955 427 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 MBD4O95243 580 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 CYP2D6P10635 497 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 BMP8BP34820 402 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 ICA1Q05084 483 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 GRB14Q14449 540 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 COG2Q14746 738 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 LRRC26Q2I0M4 334 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 LBX2Q6XYB7 198 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 SPICE1Q8N0Z3 855 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 DEFB123Q8N688 67 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 NECAB3Q96P71 396 aaPredicted RBP12.1□□□□□ -0.47
RFC5-209ENST00000543153 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 DCP1AQ9NPI6 582 aaPredicted RBP12.1□□□□□ -0.47
RFC5-209ENST00000543153 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 HOXC10Q9NYD6 342 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 FLRT1Q9NZU1 646 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 DDX20Q9UHI6 824 aaKnown RBP12.1□□□□□ -0.47
RFC5-209ENST00000543153 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
RFC5-209ENST00000543153 DOCK3Q8IZD9 2030 aa12.1□□□□□ -0.47
RFC5-209ENST00000543153 PLXNB2O15031 1838 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 FAM181BA6NEQ2 426 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 KBTBD13C9JR72 458 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 COL6A1P12109 1028 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 LORP23490 312 aaPredicted RBP12.09□□□□□ -0.47
RFC5-209ENST00000543153 ADORA2AP29274 412 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
RFC5-209ENST00000543153 HS2ST1Q7LGA3 356 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
RFC5-209ENST00000543153 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
RFC5-209ENST00000543153 SPATC1LQ9H0A9 340 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 CHMP4BQ9H444 224 aaKnown RBP12.09□□□□□ -0.47
RFC5-209ENST00000543153 SZT2Q5T011 3432 aa12.09□□□□□ -0.47
RFC5-209ENST00000543153 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 RAB11FIP3O75154 756 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 GUCY1A2P33402 732 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 GSTM4Q03013 218 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 GABPAQ06546 454 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 MB21D1Q8N884 522 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 NPLOC4Q8TAT6 608 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
RFC5-209ENST00000543153 LPAR1Q92633 364 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 TRIM11Q96F44 468 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 SCARF2Q96GP6 870 aaPredicted RBP12.08□□□□□ -0.48
RFC5-209ENST00000543153 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
RFC5-209ENST00000543153 ALPK3Q96L96 1907 aa12.07□□□□□ -0.48
RFC5-209ENST00000543153 DNM1LO00429 736 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms