RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 DNAJB3Q8WWF6 145 aa13.78□□□□□ -0.2
PTPN6-220ENST00000543115 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
PTPN6-220ENST00000543115 UHRF1Q96T88 793 aaPredicted RBP13.78□□□□□ -0.2
PTPN6-220ENST00000543115 AGO4Q9HCK5 861 aaKnown RBP13.78□□□□□ -0.2
PTPN6-220ENST00000543115 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
PTPN6-220ENST00000543115 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 MEIS1O00470 390 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 NFASCO94856 1347 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 FOSP01100 380 aaPredicted RBP13.77□□□□□ -0.21
PTPN6-220ENST00000543115 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
PTPN6-220ENST00000543115 INSRRP14616 1297 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPN6-220ENST00000543115 ACTR2P61160 394 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 LPIN1Q14693 890 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 PFKFB3Q16875 520 aaPredicted RBP13.77□□□□□ -0.21
PTPN6-220ENST00000543115 JAKMIP3Q5VZ66 844 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 MICAL3Q7RTP6 2002 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
PTPN6-220ENST00000543115 TRAPPC12Q8WVT3 735 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 APBB2Q92870 758 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 BRF1Q92994 677 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 TTC28Q96AY4 2481 aa13.77□□□□□ -0.21
PTPN6-220ENST00000543115 SIP14410 1827 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 FAM86B1E9PN63 330 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 CCNE2O96020 404 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 FAM86B2P0C5J1 330 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 SCG2P13521 617 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 FGD1P98174 961 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 AP3B2Q13367 1082 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 PKN1Q16512 942 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 IL27Q8NEV9 243 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 COG5Q9UP83 839 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 CDY2AQ9Y6F7 541 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 MUC3AQ02505 3323 aa13.76□□□□□ -0.21
PTPN6-220ENST00000543115 NID2Q14112 1375 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 IGLV3-22A0A075B6J6 115 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
PTPN6-220ENST00000543115 PPFIA3O75145 1194 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 ATG7O95352 703 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 RPS6KB1P23443 525 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 AAK1Q2M2I8 961 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 PHKBQ93100 1093 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 HLA-CQ95604 372 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 UIMC1Q96RL1 719 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 AGXT2Q9BYV1 514 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 FAM49AQ9H0Q0 323 aaPredicted RBP13.75□□□□□ -0.21
PTPN6-220ENST00000543115 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 AGO3Q9H9G7 860 aaKnown RBP13.75□□□□□ -0.21
PTPN6-220ENST00000543115 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
PTPN6-220ENST00000543115 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
PTPN6-220ENST00000543115 IGKV6D-21A0A0A0MT36 114 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 ESYT2A0FGR8 921 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 RRN3P2A6NIE6 340 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 DHX15O43143 795 aaKnown RBP13.74□□□□□ -0.21
PTPN6-220ENST00000543115 ZNF76P36508 570 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 STAT5BP51692 787 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 MRPS6P82932 125 aaKnown RBP13.74□□□□□ -0.21
PTPN6-220ENST00000543115 TMEM62Q0P6H9 643 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 NTRK3Q16288 839 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 RSPH3Q86UC2 560 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 FBXL16Q8N461 479 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 LINC01599Q8WXQ3 324 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 GLT8D2Q9H1C3 349 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 TRANK1O15050 2925 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 NCOR1O75376 2440 aa13.74□□□□□ -0.21
PTPN6-220ENST00000543115 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 ENPP3O14638 875 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 PRPF3O43395 683 aaKnown RBP13.73□□□□□ -0.21
PTPN6-220ENST00000543115 CYP3A4P08684 503 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 CD52P31358 61 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 ABHD15Q6UXT9 468 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 CCDC60Q8IWA6 550 aaPredicted RBP13.73□□□□□ -0.21
PTPN6-220ENST00000543115 TMEM192Q8IY95 271 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 RASGRP4Q8TDF6 673 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 SAMD11Q96NU1 681 aa13.73□□□□□ -0.21
PTPN6-220ENST00000543115 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
PTPN6-220ENST00000543115 H3BNC9 293 aa13.72□□□□□ -0.21
PTPN6-220ENST00000543115 EDIL3O43854 480 aa13.72□□□□□ -0.21
PTPN6-220ENST00000543115 ATP4AP20648 1035 aa13.72□□□□□ -0.21
PTPN6-220ENST00000543115 GPM6BQ13491 265 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms