RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 A0A087X0T9 212 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 POTEB3A0JP26 581 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 POTECB2RU33 542 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 HEXIM1O94992 359 aaKnown RBP18.22■□□□□ 0.51
KDM2B-216ENST00000543025 FTCDO95954 541 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 GLI1P08151 1106 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 FAM228BP0C875 321 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 CYP11B2P19099 503 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 GTF2IP78347 998 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
KDM2B-216ENST00000543025 POTEBQ6S5H4 581 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 GLT8D2Q9H1C3 349 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 DDX4Q9NQI0 724 aaKnown RBP18.22■□□□□ 0.51
KDM2B-216ENST00000543025 ADAMTS1Q9UHI8 967 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 ATAD5Q96QE3 1844 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 SRCAPQ6ZRS2 3230 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 APBA1Q02410 837 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 ARID5AQ03989 594 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 PAK2Q13177 524 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 ASIC2Q16515 512 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 KCTD1Q719H9 257 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 GANQ9H2C0 597 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 KANSL2Q9H9L4 492 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 PITPNM2Q9BZ72 1349 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 FRMD3A2A2Y4 597 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 CETN3O15182 167 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 CLSTN1O94985 981 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 TTMPQ5BVD1 217 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 ZIM3Q96PE6 472 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 EPB41L5Q9HCM4 733 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 KCNMB3Q9NPA1 279 aa18.21■□□□□ 0.51
KDM2B-216ENST00000543025 A6NNZ2 444 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 EIF3HO15372 352 aaKnown RBP eCLIP18.2■□□□□ 0.5
KDM2B-216ENST00000543025 KRT18P05783 430 aaKnown RBP18.2■□□□□ 0.5
KDM2B-216ENST00000543025 CARSP49589 748 aaKnown RBP18.2■□□□□ 0.5
KDM2B-216ENST00000543025 DNA2P51530 1060 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 GUCY2DQ02846 1103 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 KCNH2Q12809 1159 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 TUBB8Q3ZCM7 444 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 RTKN2Q8IZC4 609 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 SYT17Q9BSW7 474 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 NFU1Q9UMS0 254 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 SHMT1P34896 483 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 USP11P51784 963 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 ARL8AQ96BM9 186 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 INPP4AQ96PE3 977 aaPredicted RBP18.2■□□□□ 0.5
KDM2B-216ENST00000543025 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
KDM2B-216ENST00000543025 FAM107BQ9H098 131 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 GRIN2DO15399 1336 aa18.2■□□□□ 0.5
KDM2B-216ENST00000543025 NR2F2P24468 414 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 SLC12A3P55017 1021 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 GNGT1P63211 74 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 SKOR1P84550 965 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 SKIDA1Q1XH10 827 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 C10orf76Q5T2E6 689 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 SLFN12Q8IYM2 578 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 BCAS4Q8TDM0 211 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 PACSIN1Q9BY11 444 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 PACSIN2Q9UNF0 486 aaPredicted RBP18.19■□□□□ 0.5
KDM2B-216ENST00000543025 BTNL10A8MVZ5 291 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L15C9J2P7 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L13C9JLJ4 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L11C9JVI0 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L18D6R9N7 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L22D6RA61 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L17D6RBQ6 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L19D6RCP7 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L20D6RJB6 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L24Q0WX57 530 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 USP17L6PQ6QN14 398 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 IFT81Q8WYA0 676 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 KRT12Q99456 494 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
KDM2B-216ENST00000543025 SHTN1A0MZ66 631 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 F8W031 263 aaPredicted RBP18.18■□□□□ 0.5
KDM2B-216ENST00000543025 MED24O75448 989 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 CCT5P48643 541 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
KDM2B-216ENST00000543025 ARSHQ5FYA8 562 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 CFAP58Q5T655 872 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 MREGQ8N565 214 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 CCDC43Q96MW1 224 aaKnown RBP18.18■□□□□ 0.5
KDM2B-216ENST00000543025 UIMC1Q96RL1 719 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 PSMD1Q99460 953 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 ANO3Q9BYT9 981 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 CYP3A7-CYP3A51PA0A087WV96 503 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 ESYT3A0FGR9 886 aa18.18■□□□□ 0.5
KDM2B-216ENST00000543025 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
KDM2B-216ENST00000543025 ANKRD65E5RJM6 399 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms