RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 NARFQ9UHQ1 456 aa14.16□□□□□ -0.14
DDX11-223ENST00000542838 THRAP3Q9Y2W1 955 aaKnown RBP14.16□□□□□ -0.14
DDX11-223ENST00000542838 CTNNA1P35221 906 aaKnown RBP14.15□□□□□ -0.14
DDX11-223ENST00000542838 SETQ01105 290 aaPredicted RBP14.15□□□□□ -0.14
DDX11-223ENST00000542838 IFT88Q13099 833 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 UAP1Q16222 522 aaPredicted RBP14.15□□□□□ -0.14
DDX11-223ENST00000542838 IRF2BP2Q7Z5L9 587 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 EIF1ADQ8N9N8 165 aaKnown RBP14.15□□□□□ -0.14
DDX11-223ENST00000542838 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX11-223ENST00000542838 HDAC9Q9UKV0 1011 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 MYH7BA7E2Y1 1941 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 GPR75-ASB3A0A0A6YYF3 556 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 TMCO5BA8MYB1 307 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
DDX11-223ENST00000542838 SLC9A1P19634 815 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 ACTRT1Q8TDG2 376 aa14.15□□□□□ -0.14
DDX11-223ENST00000542838 POTEB3A0JP26 581 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 POTECB2RU33 542 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 H0YGN5 161 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 PGRMC1O00264 195 aaKnown RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 SART1O43290 800 aaKnown RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 NR2F2P24468 414 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 NOVP48745 357 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 NFIXQ14938 502 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 HYIQ5T013 277 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 CCDC91Q7Z6B0 441 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 UBLCP1Q8WVY7 318 aaPredicted RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 NCAPGQ9BPX3 1015 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 DDX47Q9H0S4 455 aaKnown RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 NEUROG2Q9H2A3 272 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 NFS1Q9Y697 457 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 PNMA6FA0A0J9YX94 578 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 SRRM3A6NNA2 597 aaPredicted RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 PLCG2P16885 1265 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 ALKBH5Q6P6C2 394 aaKnown RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 CUL5Q93034 780 aa14.14□□□□□ -0.15
DDX11-223ENST00000542838 NOC2LQ9Y3T9 749 aaKnown RBP14.14□□□□□ -0.15
DDX11-223ENST00000542838 CYP11B2P19099 503 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 CLK2P49760 499 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 ZNF844Q08AG5 666 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 ODF2Q5BJF6 829 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 METTL13Q8N6R0 699 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 LRRC57Q8N9N7 239 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 CYFIP2Q96F07 1278 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 CALR3Q96L12 384 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.13□□□□□ -0.157e-9■■■■□ 19.3
DDX11-223ENST00000542838 JMJD4Q9H9V9 463 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 NAGPAQ9UK23 515 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 BZW2Q9Y6E2 419 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 KRIT1O00522 736 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 PPP1R11O60927 126 aaPredicted RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 UCHL3P15374 230 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 KCTD19Q17RG1 926 aaPredicted RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 EDRF1Q3B7T1 1238 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 PPP1R18Q6NYC8 613 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 RUFY4Q6ZNE9 571 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 ZC3H3Q8IXZ2 948 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 GEMIN8Q9NWZ8 242 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 GGA2Q9UJY4 613 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 CNTNAP4Q9C0A0 1308 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 RGL2O15211 777 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 GCFC2P16383 781 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 MRPL12P52815 198 aaKnown RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 RHBDL3P58872 404 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 ACTN3Q08043 901 aaPredicted RBP14.13□□□□□ -0.15
DDX11-223ENST00000542838 PEX26Q7Z412 305 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
DDX11-223ENST00000542838 GMNCA6NCL1 334 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 FLOT1O75955 427 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
DDX11-223ENST00000542838 TMOD1P28289 359 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 FLT3P36888 993 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 BIRC3Q13489 604 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 GRAPQ13588 217 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 EXOC3L4Q17RC7 722 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 GRAPLQ8TC17 118 aaPredicted RBP14.12□□□□□ -0.15
DDX11-223ENST00000542838 MYCBPQ99417 103 aaPredicted RBP14.12□□□□□ -0.15
DDX11-223ENST00000542838 ARMCX3Q9UH62 379 aaPredicted RBP14.12□□□□□ -0.15
DDX11-223ENST00000542838 CCDC188H7C350 402 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 DAPK3O43293 454 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 MTMR3Q13615 1198 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 TTBK2Q6IQ55 1244 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 DPY19L2P1Q6NXN4 242 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 C6orf89Q6UWU4 347 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 CCDC121Q6ZUS5 278 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 AMACRQ9UHK6 382 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 SLC12A6Q9UHW9 1150 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 NHSQ6T4R5 1651 aa14.12□□□□□ -0.15
DDX11-223ENST00000542838 SNHG28P0DPA3 235 aa14.11□□□□□ -0.15
DDX11-223ENST00000542838 ITGA4P13612 1032 aa14.11□□□□□ -0.15
DDX11-223ENST00000542838 AKR1B1P15121 316 aa14.11□□□□□ -0.15
DDX11-223ENST00000542838 PON1P27169 355 aa14.11□□□□□ -0.15
DDX11-223ENST00000542838 CASP5P51878 434 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms