RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PTPN22Q9Y2R2 807 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 NOC2LQ9Y3T9 749 aaKnown RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 RIMBP3CA6NJZ7 1639 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RIMBP3BA6NNM3 1639 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RIMBP3Q9UFD9 1639 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 KLRG2A4D1S0 409 aaPredicted RBP4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 BIN1O00499 593 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 TPP1O14773 563 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 DYNC1LI2O43237 492 aaPredicted RBP4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RHCEP18577 417 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 LSP1P33241 339 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 HALP42357 657 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 AK2P54819 239 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 PHC1P78364 1004 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RHDQ02161 417 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 FOXD4Q12950 439 aaPredicted RBP4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF267Q14586 743 aaPredicted RBP4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 PLCL1Q15111 1095 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF174Q15697 407 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 CRY1Q16526 586 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 WDR78Q5VTH9 848 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 EEF1DP3Q658K8 133 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RCSD1Q6JBY9 416 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 XRRA1Q6P2D8 792 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 SRGAP1Q7Z6B7 1085 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 SMAP1Q8IYB5 467 aaPredicted RBP4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM186BQ8IYM0 893 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 CPXCR1Q8N123 301 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM43AQ8N2R8 423 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RCBTB1Q8NDN9 531 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 LMBR1Q8WVP7 490 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 COX4I2Q96KJ9 171 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 MYD88Q99836 296 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 RNF38Q9H0F5 515 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 CSRNP2Q9H175 543 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 LGR6Q9HBX8 967 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 CATSPERZQ9NTU4 200 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 CCM2LQ9NUG4 571 aaPredicted RBP4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 LUZP4Q9P127 313 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 CBLCQ9ULV8 474 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 DMTF1Q9Y222 760 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 LZTS1Q9Y250 596 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 PCDHA2Q9Y5H9 948 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 SPO11Q9Y5K1 396 aa4.88□□□□□ -1.63
SFSWAP-211ENST00000542813 ARHGEF11O15085 1522 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 WDR62O43379 1518 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC12A8A0AV02 714 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 A6NNZ2 444 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 NBNO60934 754 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 EOMESO95936 686 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 TPP2P29144 1249 aaPredicted RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 PPM1FP49593 454 aaPredicted RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 LACTBP83111 547 aaPredicted RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 KRT72Q14CN4 511 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 SMAD2Q15796 467 aaKnown RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 LONRF1Q17RB8 773 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 CLEC16AQ2KHT3 1053 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF792Q3KQV3 632 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 TTLL7Q6ZT98 887 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 MIER2Q8N344 545 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF610Q8N9Z0 462 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM193BQ96PV7 902 aaPredicted RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 MMP19Q99542 508 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 NAA15Q9BXJ9 866 aaKnown RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC12A9Q9BXP2 914 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 HDAC8Q9BY41 377 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 MS4A5Q9H3V2 200 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM204AQ9H8W3 233 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 TOMM22Q9NS69 142 aa4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 PPARGC1AQ9UBK2 798 aaKnown RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 FBXO9Q9UK97 447 aaPredicted RBP4.87□□□□□ -1.63
SFSWAP-211ENST00000542813 TRBV23OR9-2A0A075B6M9 112 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 NPHP3-ACAD11A0A0J9YXS1 232 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ABHD14A-ACY1A0A1B0GW23 586 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 SHISA3A0PJX4 238 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 MYO1BO43795 1136 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 KDM1AO60341 852 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ZBED1O96006 694 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 SETSIPP0DME0 302 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 MYBP10242 640 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 PDE6AP16499 860 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 PAMP19021 973 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC9A1P19634 815 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 BMP8BP34820 402 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ALDH5A1P51649 535 aaPredicted RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 IRF9Q00978 393 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 INF2Q27J81 1249 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ALFQ53S48 1182 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ATAT1Q5SQI0 421 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF574Q6ZN55 896 aaPredicted RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 SPRED2Q7Z698 418 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 TOP6BLQ8N6T0 577 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ZBTB34Q8NCN2 500 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ENOX1Q8TC92 643 aaKnown RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 DIS3LQ8TF46 1054 aaKnown RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 TGFBRAP1Q8WUH2 860 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms