RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 QARSP47897 775 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 ME1P48163 572 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 MNX1P50219 401 aaPredicted RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 PSMC5P62195 406 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 PURAQ00577 322 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 LRRC41Q15345 812 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 TARBP2Q15633 366 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 KCNA10Q16322 511 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 FSCN1Q16658 493 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 DGKDQ16760 1214 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 BRDTQ58F21 947 aaPredicted RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 GNASQ5JWF2 1037 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 MIS18BP1Q6P0N0 1132 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 RNF180Q86T96 592 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 CCDC60Q8IWA6 550 aaPredicted RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 ELOA2Q8IYF1 753 aaPredicted RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 ANKLE1Q8NAG6 615 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 PCSK9Q8NBP7 692 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 ENGASEQ8NFI3 743 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 KAT2BQ92831 832 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 DYDC2Q96IM9 177 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 EPSTI1Q96J88 318 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 DEFB118Q96PH6 123 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 GBP4Q96PP9 640 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 PNMA5Q96PV4 448 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 UIMC1Q96RL1 719 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 CEP89Q96ST8 783 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 NIFKQ9BYG3 293 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 NT5C3AQ9H0P0 336 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 RNF208Q9H0X6 261 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 TUT1Q9H6E5 874 aaKnown RBP6.59□□□□□ -1.35
ABCF1-207ENST00000542772 ZSWIM4Q9H7M6 989 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 SPC25Q9HBM1 224 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 GDPD2Q9HCC8 539 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 RGL1Q9NZL6 768 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 PKD2L1Q9P0L9 805 aa6.59□□□□□ -1.35
ABCF1-207ENST00000542772 MYH9P35579 1960 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 MYADML2A6NDP7 307 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 PP2D1A8MPX8 630 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 DNM1LO00429 736 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 NOP56O00567 594 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ZEB2O60315 1214 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 GADD45BO75293 160 aaPredicted RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 PRPF40AO75400 957 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 CABYRO75952 493 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 F2P00734 622 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 LGALS2P05162 132 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ASGR1P07306 291 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 C6orf222P0C671 652 aaPredicted RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 NCLP19338 710 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 HOXC8P31273 242 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 CDK7P50613 346 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ACLYP53396 1101 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 UBE2HP62256 183 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ADAM17P78536 824 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 BEX3Q00994 111 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 GRB10Q13322 594 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 E2F4Q16254 413 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 TMEM119Q4V9L6 283 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 NAALADL2Q58DX5 795 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 XKR3Q5GH77 459 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SPECC1Q5M775 1068 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 KRT79Q5XKE5 535 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 HAUS3Q68CZ6 603 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 NCAPH2Q6IBW4 605 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 CABP7Q86V35 215 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SESTD1Q86VW0 696 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SLC43A3Q8NBI5 491 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ERMNQ8TAM6 284 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 U2AF1L4Q8WU68 220 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 BBXQ8WY36 941 aaPredicted RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 NACC1Q96RE7 527 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SEZ6LQ9BYH1 1024 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 RNPEPQ9H4A4 650 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ZNF302Q9NR11 478 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 PDLIM7Q9NR12 457 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 NRBP2Q9NSY0 501 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ANKEF1Q9NU02 776 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 ERAP1Q9NZ08 941 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 WRAP73Q9P2S5 460 aaPredicted RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 GABBR1Q9UBS5 961 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 TCEAL9Q9UHQ7 104 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
ABCF1-207ENST00000542772 PHF24Q9UPV7 400 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 SAMM50Q9Y512 469 aa6.58□□□□□ -1.36
ABCF1-207ENST00000542772 BRCA2P51587 3418 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 FRMPD3Q5JV73 1810 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 GRIN2DO15399 1336 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 IGSF9BQ9UPX0 1349 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 KDM3AQ9Y4C1 1321 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 A0A087X0B3 334 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 A0A1B0GVL5 298 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 ZBTB39O15060 712 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 CHMP2AO43633 222 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 HBP1O60381 514 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 SORBS3O60504 671 aa6.57□□□□□ -1.36
ABCF1-207ENST00000542772 COL6A1P12109 1028 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms