RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SUPT6HQ7KZ85 1726 aaKnown RBP7.35□□□□□ -1.23
XRCC4-206ENST00000542685 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 TCERG1O14776 1098 aaKnown RBP7.35□□□□□ -1.23
XRCC4-206ENST00000542685 ATP2B1P20020 1258 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 GGNQ86UU5 652 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 FTSJ3Q8IY81 847 aaKnown RBP7.35□□□□□ -1.23
XRCC4-206ENST00000542685 TTLL11Q8NHH1 800 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 UHMK1Q8TAS1 419 aaKnown RBP7.35□□□□□ -1.23
XRCC4-206ENST00000542685 ZNF669Q96BR6 464 aaPredicted RBP7.35□□□□□ -1.23
XRCC4-206ENST00000542685 WRNIP1Q96S55 665 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 CDC6Q99741 560 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 ALG1Q9BT22 464 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 IPPKQ9H8X2 491 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 DSEQ9UL01 958 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 MSRB2Q9Y3D2 182 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 SNAPC4Q5SXM2 1469 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 FGD6Q6ZV73 1430 aa7.35□□□□□ -1.23
XRCC4-206ENST00000542685 FAM47E-STBD1D6RA91 191 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 B4GALT3O60512 393 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
XRCC4-206ENST00000542685 PAN2Q504Q3 1202 aaKnown RBP7.34□□□□□ -1.23
XRCC4-206ENST00000542685 DPH6Q7L8W6 267 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 PROSER1Q86XN7 944 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 FRAT1Q92837 279 aaPredicted RBP7.34□□□□□ -1.23
XRCC4-206ENST00000542685 SMPD4Q9NXE4 827 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 HSPBP1Q9NZL4 362 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 FTSJ1Q9UET6 329 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 ISY1Q9ULR0 285 aaKnown RBP7.34□□□□□ -1.23
XRCC4-206ENST00000542685 JAG2Q9Y219 1238 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 TELO2Q9Y4R8 837 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 NUB1Q9Y5A7 615 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 TCOF1Q13428 1488 aaKnown RBP7.34□□□□□ -1.23
XRCC4-206ENST00000542685 FMN1Q68DA7 1419 aa7.34□□□□□ -1.23
XRCC4-206ENST00000542685 ABCA10Q8WWZ4 1543 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 CKMP06732 381 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 FAHP16930 419 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 MAGEA10P43363 369 aaPredicted RBP7.33□□□□□ -1.24
XRCC4-206ENST00000542685 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
XRCC4-206ENST00000542685 RASGRF1Q13972 1273 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
XRCC4-206ENST00000542685 LOXL4Q96JB6 756 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 GPR20Q99678 358 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 ZDHHC9Q9Y397 364 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
XRCC4-206ENST00000542685 LRRIQ1Q96JM4 1722 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 ADCY3O60266 1144 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 KIF20AO95235 890 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 GTF2F1P35269 517 aaKnown RBP eCLIP7.32□□□□□ -1.24
XRCC4-206ENST00000542685 HABP4Q5JVS0 413 aaKnown RBP7.32□□□□□ -1.24
XRCC4-206ENST00000542685 FAM209AQ5JX71 171 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 GLB1LQ6UWU2 654 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 LIMS2Q7Z4I7 341 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 MTDHQ86UE4 582 aaKnown RBP7.32□□□□□ -1.24
XRCC4-206ENST00000542685 SCUBE1Q8IWY4 988 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 DTX3Q8N9I9 347 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 BORCS6Q96GS4 357 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 DLL4Q9NR61 685 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 CARMIL1Q5VZK9 1371 aa7.32□□□□□ -1.24
XRCC4-206ENST00000542685 TRBV23-1A0A0A0MS06 115 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 GOLGA6L3A6NEY3 463 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 LAMTOR5O43504 91 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
XRCC4-206ENST00000542685 FBXO21O94952 628 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 INSRRP14616 1297 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 GLRBP48167 497 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 SKIDA1Q1XH10 827 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 FOXB2Q5VYV0 432 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 KCTD1Q719H9 257 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 KBTBD2Q8IY47 623 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 MBD6Q96DN6 1003 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 CD244Q9BZW8 370 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 CCDC113Q9H0I3 377 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 CNTLNQ9NXG0 1405 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 UGGT2Q9NYU1 1516 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 TONSLQ96HA7 1378 aa7.31□□□□□ -1.24
XRCC4-206ENST00000542685 RNF123Q5XPI4 1314 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 AQP7O14520 342 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 PFKPQ01813 784 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 NFATC3Q12968 1075 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 PAK1Q13153 545 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 SURF1Q15526 300 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 ZXDCQ2QGD7 858 aaPredicted RBP7.3□□□□□ -1.24
XRCC4-206ENST00000542685 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 CD276Q5ZPR3 534 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 PLEKHH3Q7Z736 793 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 ZBTB38Q8NAP3 1195 aaPredicted RBP7.3□□□□□ -1.24
XRCC4-206ENST00000542685 NUDT10Q8NFP7 164 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 PTPRN2Q92932 1015 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 TRIM44Q96DX7 344 aaPredicted RBP7.3□□□□□ -1.24
XRCC4-206ENST00000542685 NUDT11Q96G61 164 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 C8orf49Q96NF6 230 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 SAMD11Q96NU1 681 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 BARX1Q9HBU1 254 aaPredicted RBP7.3□□□□□ -1.24
XRCC4-206ENST00000542685 RRAGDQ9NQL2 400 aaPredicted RBP7.3□□□□□ -1.24
XRCC4-206ENST00000542685 SIRPGQ9P1W8 387 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 ZFP69BQ9UJL9 534 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 PCDHA8Q9Y5H6 950 aa7.3□□□□□ -1.24
XRCC4-206ENST00000542685 ZBED9Q6R2W3 1325 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 NAIPQ13075 1403 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms