RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 DDX3XO00571 662 aaKnown RBP eCLIP6.18□□□□□ -1.42
MDM2-228ENST00000542502 FPR2P25090 351 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 HSPA2P54652 639 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
MDM2-228ENST00000542502 GLB1LQ6UWU2 654 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 Q8N1Y9 231 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 CHST13Q8NET6 341 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 LCORQ96JN0 433 aaPredicted RBP6.18□□□□□ -1.42
MDM2-228ENST00000542502 MRGPRX3Q96LB0 322 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 IGSF5Q9NSI5 407 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.18□□□□□ -1.42
MDM2-228ENST00000542502 TIMM13Q9Y5L4 95 aaPredicted RBP6.18□□□□□ -1.42
MDM2-228ENST00000542502 X6R8D5 127 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 IFT172Q9UG01 1749 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 NEXMIFQ5QGS0 1516 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 ZNF536O15090 1300 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 SETBP1Q9Y6X0 1596 aa6.18□□□□□ -1.42
MDM2-228ENST00000542502 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
MDM2-228ENST00000542502 STAT5AP42229 794 aa6.17□□□□□ -1.42
MDM2-228ENST00000542502 CYP4F3Q08477 520 aa6.17□□□□□ -1.42
MDM2-228ENST00000542502 NCAPHQ15003 741 aa6.17□□□□□ -1.42
MDM2-228ENST00000542502 CR1LQ2VPA4 569 aa6.17□□□□□ -1.42
MDM2-228ENST00000542502 E4F1Q66K89 784 aaPredicted RBP6.17□□□□□ -1.42
MDM2-228ENST00000542502 CEP68Q76N32 757 aa6.17□□□□□ -1.42
MDM2-228ENST00000542502 DVL3Q92997 716 aaPredicted RBP6.17□□□□□ -1.42
MDM2-228ENST00000542502 KIAA1210Q9ULL0 1709 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 CPS1P31327 1500 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 GTF2A2P52657 109 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 NKX3-2P78367 333 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 ADAM9Q13443 819 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 SURF1Q15526 300 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 LIMS2Q7Z4I7 341 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 NT5DC4Q86YG4 428 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 PPP1R14AQ96A00 147 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 TRMT2BQ96GJ1 504 aaKnown RBP6.16□□□□□ -1.42
MDM2-228ENST00000542502 STRIP2Q9ULQ0 834 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 NCOA3Q9Y6Q9 1424 aa6.16□□□□□ -1.42
MDM2-228ENST00000542502 IQSEC2Q5JU85 1478 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 NRXN1Q9ULB1 1477 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 LAMTOR5O43504 91 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 B4GALT3O60512 393 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 ZNF28P17035 718 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 KCNA6P17658 529 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 NLRP10Q86W26 655 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 CCDC103Q8IW40 242 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 DIO2Q92813 273 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 YIPF4Q9BSR8 244 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 LGR4Q9BXB1 951 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 ST6GALNAC2Q9UJ37 374 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 ZNF652Q9Y2D9 606 aa6.15□□□□□ -1.42
MDM2-228ENST00000542502 PIK3C2GO75747 1445 aa6.15□□□□□ -1.43
MDM2-228ENST00000542502 NKTRP30414 1462 aaKnown RBP6.15□□□□□ -1.43
MDM2-228ENST00000542502 CHD2O14647 1828 aaKnown RBP6.14□□□□□ -1.43
MDM2-228ENST00000542502 MYO1BO43795 1136 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 HOXC12P31275 282 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 ZEB1P37275 1124 aaPredicted RBP6.14□□□□□ -1.43
MDM2-228ENST00000542502 BCL6P41182 706 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 HDLBPQ00341 1268 aaKnown RBP6.14□□□□□ -1.43
MDM2-228ENST00000542502 KCNAB2Q13303 367 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 CHRNA2Q15822 529 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 PLEKHH3Q7Z736 793 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 SLC16A11Q8NCK7 471 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 BTN2A2Q8WVV5 523 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 TMEM169Q96HH4 297 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 C14orf93Q9H972 538 aaKnown RBP6.14□□□□□ -1.43
MDM2-228ENST00000542502 SRRDQ9UH36 339 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 TMEFF2Q9UIK5 374 aaPredicted RBP6.14□□□□□ -1.43
MDM2-228ENST00000542502 PRAG1Q86YV5 1406 aa6.14□□□□□ -1.43
MDM2-228ENST00000542502 ARNTLO00327 626 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 HGSO14964 777 aaPredicted RBP6.13□□□□□ -1.43
MDM2-228ENST00000542502 FSHBP01225 129 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 CYP1A1P04798 512 aaPredicted RBP6.13□□□□□ -1.43
MDM2-228ENST00000542502 SCG5P05408 212 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 IL13P35225 146 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 KISS1RQ969F8 398 aaPredicted RBP6.13□□□□□ -1.43
MDM2-228ENST00000542502 ANAPC16Q96DE5 110 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 TOE1Q96GM8 510 aaKnown RBP6.13□□□□□ -1.43
MDM2-228ENST00000542502 PPP4R1LQ9P1A2 415 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 COA3Q9Y2R0 106 aaPredicted RBP6.13□□□□□ -1.43
MDM2-228ENST00000542502 TSC22D4Q9Y3Q8 395 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 ALKQ9UM73 1620 aa6.13□□□□□ -1.43
MDM2-228ENST00000542502 MEFVO15553 781 aaPredicted RBP6.12□□□□□ -1.43
MDM2-228ENST00000542502 TBX1O43435 398 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 SNRPB2P08579 225 aaKnown RBP6.12□□□□□ -1.43
MDM2-228ENST00000542502 ECI1P42126 302 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 EIF3AQ14152 1382 aaKnown RBP6.12□□□□□ -1.43
MDM2-228ENST00000542502 NWD1Q149M9 1564 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 TESK1Q15569 626 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 ACBD5Q5T8D3 534 aaPredicted RBP6.12□□□□□ -1.43
MDM2-228ENST00000542502 KRTAP5-3Q6L8H2 238 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 ADAMTS13Q76LX8 1427 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 ADGRF5Q8IZF2 1346 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 KREMEN2Q8NCW0 462 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 MBD6Q96DN6 1003 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 ABCC11Q96J66 1382 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 YTHDC1Q96MU7 727 aaKnown RBP6.12□□□□□ -1.43
MDM2-228ENST00000542502 CLIC6Q96NY7 704 aa6.12□□□□□ -1.43
MDM2-228ENST00000542502 SIN3AQ96ST3 1273 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms