RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 DIS3Q9Y2L1 958 aaKnown RBP7.43□□□□□ -1.22
NKRF-204ENST00000542113 PCDHA2Q9Y5H9 948 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 NDUFAB1O14561 156 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 TLR2O60603 784 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 KIF4AO95239 1232 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 HSPA9P38646 679 aaKnown RBP7.43□□□□□ -1.22
NKRF-204ENST00000542113 CCT5P48643 541 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 KCNQ4P56696 695 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 ATP2B2Q01814 1243 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 BMT2Q1RMZ1 405 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 IQCKQ8N0W5 287 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 CCDC26Q8TAB7 109 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 IFT81Q8WYA0 676 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 KRT12Q99456 494 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 ISCUQ9H1K1 167 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 SLITRK6Q9H5Y7 841 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 ADAMTS1Q9UHI8 967 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 SALL4Q9UJQ4 1053 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 NFU1Q9UMS0 254 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 A0A087X0T9 212 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 POTEB3A0JP26 581 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 POTECB2RU33 542 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 E9PMD0 336 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 TULP1O00294 542 aaPredicted RBP7.43□□□□□ -1.22
NKRF-204ENST00000542113 MPHOSPH10O00566 681 aaKnown RBP7.43□□□□□ -1.22
NKRF-204ENST00000542113 FTCDO95954 541 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 FAM228BP0C875 321 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 RPA1P27694 616 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 POTEBQ6S5H4 581 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 MAATS1Q7Z4T9 603 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 SYT2Q8N9I0 419 aaPredicted RBP7.43□□□□□ -1.22
NKRF-204ENST00000542113 C3orf20Q8ND61 904 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 NAP1L3Q99457 506 aaPredicted RBP7.43□□□□□ -1.22
NKRF-204ENST00000542113 ZHX3Q9H4I2 956 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 ATAD5Q96QE3 1844 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 UBE4BO95155 1302 aa7.43□□□□□ -1.22
NKRF-204ENST00000542113 SPDYE3A6NKU9 549 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 KCNK3O14649 394 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 ERLIN2O94905 339 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TRIM37O94972 964 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 H2AFZP0C0S5 128 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 UCHL3P15374 230 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 NR1D1P20393 614 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 NOP2P46087 812 aaKnown RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 SLC12A3P55017 1021 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 BIRC3Q13489 604 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 HLTFQ14527 1009 aaKnown RBP eCLIP7.42□□□□□ -1.22
NKRF-204ENST00000542113 Q4G0T1 1027 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 HHIPL2Q6UWX4 724 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 H2AFVQ71UI9 128 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TSEN2Q8NCE0 465 aaKnown RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 ATP6V1G3Q96LB4 118 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TMX4Q9H1E5 349 aaPredicted RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 NYAP2Q9P242 653 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 GGA2Q9UJY4 613 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TMEM59LQ9UK28 342 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 PCDHA1Q9Y5I3 950 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 FAM169AQ9Y6X4 670 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 GCOM1H8Y6P7 765 aaPredicted RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 NKRFO15226 690 aaKnown RBP eCLIP7.42□□□□□ -1.22
NKRF-204ENST00000542113 EDIL3O43854 480 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 GLI1P08151 1106 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 MYZAPP0CAP1 466 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 INPP5BP32019 993 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 CARSP49589 748 aaKnown RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 GTF2IP78347 998 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 ECM1Q16610 540 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 NFIL3Q16649 462 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 ALKBH5Q6P6C2 394 aaKnown RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TEKT1Q969V4 418 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 MKL1Q969V6 931 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 GPR101Q96P66 508 aaPredicted RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
NKRF-204ENST00000542113 PAGR1Q9BTK6 254 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 AMNQ9BXJ7 453 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 KANSL2Q9H9L4 492 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 USP40Q9NVE5 1235 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TBC1D7Q9P0N9 293 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 SUCLA2Q9P2R7 463 aaPredicted RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 GRIN2DO15399 1336 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 USP17L10C9JJH3 530 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 EIF3DO15371 548 aaKnown RBP eCLIP7.42□□□□□ -1.22
NKRF-204ENST00000542113 SERPINB2P05120 415 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 MYBP10242 640 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 LMNB1P20700 586 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 RFX1P22670 979 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 SHMT1P34896 483 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 STAT1P42224 750 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 EIF6P56537 245 aaKnown RBP7.42□□□□□ -1.22
NKRF-204ENST00000542113 ARHGAP4P98171 946 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 ARID5AQ03989 594 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 QRICH1Q2TAL8 776 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 TTMPQ5BVD1 217 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 SPDYCQ5MJ68 293 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 ARMC9Q7Z3E5 817 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 PEX26Q7Z412 305 aa7.42□□□□□ -1.22
NKRF-204ENST00000542113 GLIS3Q8NEA6 775 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms