RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SNX24Q9Y343 169 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 CAPN6Q9Y6Q1 641 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
VARS2-212ENST00000542001 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
VARS2-212ENST00000542001 RGS16O15492 202 aaPredicted RBP17.53■□□□□ 0.4
VARS2-212ENST00000542001 OSTNP61366 133 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 DENND2CQ68D51 928 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 GLG1Q92896 1179 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 TBK1Q9UHD2 729 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 RSPH10B2B2RC85 870 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ZBED4O75132 1171 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 RSPH10BP0C881 870 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 EPHB4P54760 987 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ZKSCAN8Q15776 578 aaPredicted RBP17.53■□□□□ 0.4
VARS2-212ENST00000542001 OTUD6AQ7L8S5 288 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 SYCE1Q8N0S2 351 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 MLXIPLQ9NP71 852 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 NOVA2Q9UNW9 492 aaKnown RBP17.53■□□□□ 0.4
VARS2-212ENST00000542001 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
VARS2-212ENST00000542001 STRN3Q13033 797 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 RUFY4Q6ZNE9 571 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 KIFAP3Q92845 792 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ZMYND12Q9H0C1 365 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
VARS2-212ENST00000542001 ZNF446Q9NWS9 450 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 SAMD15Q9P1V8 674 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ANKRD26Q9UPS8 1709 aa17.53■□□□□ 0.4
VARS2-212ENST00000542001 ECE2O60344 883 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 NF2P35240 595 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 COPB2P35606 906 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 PIK3C2AO00443 1686 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 JCADQ9P266 1359 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 EIF3CLB5ME19 914 aaKnown RBP17.52■□□□□ 0.4
VARS2-212ENST00000542001 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
VARS2-212ENST00000542001 ADAMTS3O15072 1205 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 ATP8B1O43520 1251 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 MYBP10242 640 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 IRX3P78415 501 aaPredicted RBP17.52■□□□□ 0.4
VARS2-212ENST00000542001 KCNB1Q14721 858 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 ZNF653Q96CK0 615 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 EIF3CQ99613 913 aaKnown RBP17.52■□□□□ 0.4
VARS2-212ENST00000542001 DHX36Q9H2U1 1008 aaKnown RBP17.52■□□□□ 0.4
VARS2-212ENST00000542001 RAVER2Q9HCJ3 691 aaKnown RBP17.52■□□□□ 0.4
VARS2-212ENST00000542001 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.4
VARS2-212ENST00000542001 PVALEFA0A1B0GWK0 134 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 NDUFB10O96000 172 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 KRT14P02533 472 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 E2F4Q16254 413 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.39
VARS2-212ENST00000542001 NAP1L3Q99457 506 aaPredicted RBP17.52■□□□□ 0.39
VARS2-212ENST00000542001 CCDC77Q9BR77 488 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 KCNQ5Q9NR82 932 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 FBXO28Q9NVF7 368 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 H2AFXP16104 143 aaPredicted RBP17.52■□□□□ 0.39
VARS2-212ENST00000542001 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.39
VARS2-212ENST00000542001 ELMO3Q96BJ8 720 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 SAAL1Q96ER3 474 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 THOC1Q96FV9 657 aaKnown RBP17.52■□□□□ 0.39
VARS2-212ENST00000542001 CEP170P1Q96L14 293 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 ADAM33Q9BZ11 813 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 AMACRQ9UHK6 382 aa17.52■□□□□ 0.39
VARS2-212ENST00000542001 SASH3O75995 380 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 SARSP49591 514 aaKnown RBP17.51■□□□□ 0.39
VARS2-212ENST00000542001 ZBTB16Q05516 673 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 METTL13Q8N6R0 699 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 ANKS4BQ8N8V4 417 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 OR2W6PQ8NHA6 318 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 TMOD4Q9NZQ9 345 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 SEPT9Q9UHD8 586 aaPredicted RBP17.51■□□□□ 0.39
VARS2-212ENST00000542001 MYO1CO00159 1063 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 ADCY8P40145 1251 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 LIG4P49917 911 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 CYP4F22Q6NT55 531 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 RBM12Q9NTZ6 932 aaKnown RBP17.51■□□□□ 0.39
VARS2-212ENST00000542001 DMGDHQ9UI17 866 aaKnown RBP17.51■□□□□ 0.39
VARS2-212ENST00000542001 SLC16A4O15374 487 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 NPR1P16066 1061 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 KLRC1P26715 233 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 GRB10Q13322 594 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 TRPC3Q13507 836 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 KNOP1Q1ED39 458 aaKnown RBP17.51■□□□□ 0.39
VARS2-212ENST00000542001 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 C16orf86Q6ZW13 317 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 CYP2W1Q8TAV3 490 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 BAIAP2L1Q9UHR4 511 aa17.51■□□□□ 0.39
VARS2-212ENST00000542001 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
VARS2-212ENST00000542001 IGBP1P78318 339 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 IL17AQ16552 155 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 MTERF2Q49AM1 385 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 CDKAL1Q5VV42 579 aa17.5■□□□□ 0.39
VARS2-212ENST00000542001 TTI2Q6NXR4 508 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms