RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 PLPPR4Q7Z2D5 763 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 MAFAQ8NHW3 353 aaPredicted RBP25.08■■□□□ 1.61
C2CD3-216ENST00000541922 UIMC1Q96RL1 719 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 GAS2L1Q99501 681 aaPredicted RBP25.08■■□□□ 1.61
C2CD3-216ENST00000541922 ZNF577Q9BSK1 485 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 PRDM12Q9H4Q4 367 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 TUBE1Q9UJT0 475 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 TPCN1Q9ULQ1 816 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 PCDHA4Q9UN74 947 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 TRPC6Q9Y210 931 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 RRN3P2A6NIE6 340 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 PFKFB2O60825 505 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 ATG7O95352 703 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 CCNE2O96020 404 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 CIITAP33076 1130 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 IGBP1P78318 339 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 FAM177A1Q8N128 213 aaPredicted RBP25.07■■□□□ 1.6
C2CD3-216ENST00000541922 DBF4BQ8NFT6 615 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 C22orf23Q9BZE7 217 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 TBC1D22BQ9NU19 505 aa25.07■■□□□ 1.6
C2CD3-216ENST00000541922 DHX15O43143 795 aaKnown RBP25.06■■□□□ 1.6
C2CD3-216ENST00000541922 INSRRP14616 1297 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 AK2P54819 239 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 PLCB4Q15147 1175 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 FAM160B1Q5W0V3 765 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 RUFY4Q6ZNE9 571 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 RSPH3Q86UC2 560 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 IL17RAQ96F46 866 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 AIFM3Q96NN9 605 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 TCEAL9Q9UHQ7 104 aa25.06■■□□□ 1.6
C2CD3-216ENST00000541922 COL6A3P12111 3177 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 MBLAC1A4D2B0 266 aaPredicted RBP25.05■■□□□ 1.6
C2CD3-216ENST00000541922 BACH1O14867 736 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 CA3P07451 260 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 SLC26A2P50443 739 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 USP11P51784 963 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 DEFB103AP81534 67 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 PLEKHG4Q58EX7 1191 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 FAM26DQ5JW98 314 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 GALNT17Q6IS24 598 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 MIS18BP1Q6P0N0 1132 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 ABHD15Q6UXT9 468 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 RPAINQ86UA6 219 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 BLIDQ8IZY5 108 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 SEPT8Q92599 483 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 ZBED2Q9BTP6 218 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 MICAL3Q7RTP6 2002 aa25.05■■□□□ 1.6
C2CD3-216ENST00000541922 IGKV6D-21A0A0A0MT36 114 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 POTEB3A0JP26 581 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 TLL1O43897 1013 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 MARCH8Q5T0T0 291 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 POTEBQ6S5H4 581 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 DAGLBQ8NCG7 672 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 TBCKQ8TEA7 893 aa25.04■■□□□ 1.6
C2CD3-216ENST00000541922 MYH9P35579 1960 aaKnown RBP25.04■■□□□ 1.6
C2CD3-216ENST00000541922 RBAK-RBAKDNI3L0D1 243 aa25.03■■□□□ 1.6
C2CD3-216ENST00000541922 SEC24BO95487 1268 aa25.03■■□□□ 1.6
C2CD3-216ENST00000541922 ZNF746Q6NUN9 644 aaPredicted RBP25.03■■□□□ 1.6
C2CD3-216ENST00000541922 TMCO2Q7Z6W1 182 aaPredicted RBP25.03■■□□□ 1.6
C2CD3-216ENST00000541922 DNAJB3Q8WWF6 145 aa25.03■■□□□ 1.6
C2CD3-216ENST00000541922 ZNF302Q9NR11 478 aa25.03■■□□□ 1.6
C2CD3-216ENST00000541922 STK36Q9NRP7 1315 aa25.03■■□□□ 1.6
C2CD3-216ENST00000541922 CHRNA1P02708 482 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 RPLP2P05387 115 aaKnown RBP25.02■■□□□ 1.6
C2CD3-216ENST00000541922 XBP1P17861 261 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 NEK4P51957 841 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 KRT76Q01546 638 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 PDXDC2PQ6P474 469 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 CCDC60Q8IWA6 550 aaPredicted RBP25.02■■□□□ 1.6
C2CD3-216ENST00000541922 SMAP1Q8IYB5 467 aaPredicted RBP25.02■■□□□ 1.6
C2CD3-216ENST00000541922 LENG9Q96B70 501 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 OSBPL7Q9BZF2 842 aa25.02■■□□□ 1.6
C2CD3-216ENST00000541922 M0R2N6 131 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 EDIL3O43854 480 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 NPY5RQ15761 445 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 SWSAP1Q6NVH7 229 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.01■■□□□ 1.59
C2CD3-216ENST00000541922 TRAPPC12Q8WVT3 735 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 ZBTB10Q96DT7 871 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 FAM49AQ9H0Q0 323 aaPredicted RBP25.01■■□□□ 1.59
C2CD3-216ENST00000541922 KCNJ14Q9UNX9 436 aa25.01■■□□□ 1.59
C2CD3-216ENST00000541922 HBP1O60381 514 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 GJB5O95377 273 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 AMHP03971 560 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 IGFBP4P22692 258 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 ATP8B4Q8TF62 1192 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 APBB2Q92870 758 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 IFIH1Q9BYX4 1025 aaKnown RBP25■■□□□ 1.59
C2CD3-216ENST00000541922 ORC3Q9UBD5 711 aaPredicted RBP25■■□□□ 1.59
C2CD3-216ENST00000541922 SAMM50Q9Y512 469 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 PCDHA2Q9Y5H9 948 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 PCDHA10Q9Y5I2 948 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 SIP14410 1827 aa25■■□□□ 1.59
C2CD3-216ENST00000541922 MSH4O15457 936 aa24.99■■□□□ 1.59
C2CD3-216ENST00000541922 PSAPP07602 524 aa24.99■■□□□ 1.59
C2CD3-216ENST00000541922 TAP1Q03518 808 aa24.99■■□□□ 1.59
C2CD3-216ENST00000541922 MGAT3Q09327 533 aa24.99■■□□□ 1.59
C2CD3-216ENST00000541922 MKRN4PQ13434 485 aaPredicted RBP24.99■■□□□ 1.59
C2CD3-216ENST00000541922 ADGRE1Q14246 886 aa24.99■■□□□ 1.59
C2CD3-216ENST00000541922 NONOQ15233 471 aaKnown RBP eCLIP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms