RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 AADACL2Q6P093 401 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 AFAP1L1Q8TED9 768 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 BAP1Q92560 729 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 TLR10Q9BXR5 811 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 DNM3Q9UQ16 869 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 LRP5O75197 1615 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 LAD1O00515 517 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 ASIC2Q16515 512 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 CCDC70Q6NSX1 233 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 FBXO11Q86XK2 927 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 GUF1Q8N442 669 aaKnown RBP16.51■□□□□ 0.23
VARS2-211ENST00000541562 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 NOX5Q96PH1 765 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 GOLGA6CA6NDK9 693 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 CETN3O15182 167 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 AKAP3O75969 853 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 GOLGA6DP0CG33 693 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 DYDC2Q96IM9 177 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 CELF4Q9BZC1 486 aaKnown RBP16.51■□□□□ 0.23
VARS2-211ENST00000541562 GOLGA6AQ9NYA3 693 aa16.51■□□□□ 0.23
VARS2-211ENST00000541562 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
VARS2-211ENST00000541562 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
VARS2-211ENST00000541562 FAM198AQ9UFP1 575 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 ECM2O94769 699 aaPredicted RBP16.5■□□□□ 0.23
VARS2-211ENST00000541562 MEA1Q16626 185 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 KLHDC7AQ5VTJ3 777 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 TRIM58Q8NG06 486 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 ERGIC2Q96RQ1 377 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 ARMCX3Q9UH62 379 aaPredicted RBP16.5■□□□□ 0.23
VARS2-211ENST00000541562 RAB21Q9UL25 225 aa16.5■□□□□ 0.23
VARS2-211ENST00000541562 ECE2O60344 883 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 PRKG1Q13976 671 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 DHX36Q9H2U1 1008 aaKnown RBP16.49■□□□□ 0.23
VARS2-211ENST00000541562 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 OSGEPQ9NPF4 335 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 MEIS2O14770 477 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 ITGA4P13612 1032 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 SOX10P56693 466 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 JRKLQ9Y4A0 524 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 HGSO14964 777 aaPredicted RBP16.49■□□□□ 0.23
VARS2-211ENST00000541562 ATMINO43313 823 aaPredicted RBP16.49■□□□□ 0.23
VARS2-211ENST00000541562 ACTN2P35609 894 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 GABPAQ06546 454 aa16.49■□□□□ 0.23
VARS2-211ENST00000541562 ZNF571Q7Z3V5 609 aaPredicted RBP16.49■□□□□ 0.23
VARS2-211ENST00000541562 TNRC6CQ9HCJ0 1690 aaKnown RBP16.49■□□□□ 0.23
VARS2-211ENST00000541562 FAM13AO94988 1023 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 CKAP4Q07065 602 aaKnown RBP16.48■□□□□ 0.23
VARS2-211ENST00000541562 PAPD7Q5XG87 772 aaKnown RBP16.48■□□□□ 0.23
VARS2-211ENST00000541562 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 RETREG2Q8NC44 543 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 BBXQ8WY36 941 aaPredicted RBP16.48■□□□□ 0.23
VARS2-211ENST00000541562 HOOK2Q96ED9 719 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 GCNT4Q9P109 453 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 MSH4O15457 936 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 HGSNATQ68CP4 663 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 ABCB11O95342 1321 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 FXR2P51116 673 aaKnown RBP eCLIP16.48■□□□□ 0.23
VARS2-211ENST00000541562 GNGT1P63211 74 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 EXOC3L4Q17RC7 722 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 CT47A1Q5JQC4 288 aaPredicted RBP16.48■□□□□ 0.23
VARS2-211ENST00000541562 LRRC31Q6UY01 552 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 STK17AQ9UEE5 414 aa16.48■□□□□ 0.23
VARS2-211ENST00000541562 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 XRCC5P13010 732 aaKnown RBP16.47■□□□□ 0.23
VARS2-211ENST00000541562 DHX9Q08211 1270 aaKnown RBP16.47■□□□□ 0.23
VARS2-211ENST00000541562 DAAM2Q86T65 1068 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 CCDC170Q8IYT3 715 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 TAF4BQ92750 862 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 KIFC3Q9BVG8 833 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 TMEM39BQ9GZU3 492 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 COA1Q9GZY4 146 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.47■□□□□ 0.23
VARS2-211ENST00000541562 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 AGPSO00116 658 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 MYO1CO00159 1063 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 PPIP5K2O43314 1243 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 GUCY1A3Q02108 690 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 CPNE8Q86YQ8 564 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 RRP15Q9Y3B9 282 aaKnown RBP16.47■□□□□ 0.23
VARS2-211ENST00000541562 TLDC2A0PJX2 215 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 MYCLP12524 364 aaPredicted RBP16.47■□□□□ 0.23
VARS2-211ENST00000541562 LIG3P49916 1009 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 EHBP1Q8NDI1 1231 aa16.47■□□□□ 0.23
VARS2-211ENST00000541562 CUEDC2Q9H467 287 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms