RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 USP42Q9H9J4 1324 aaKnown RBP7.44□□□□□ -1.22
SUDS3-202ENST00000541280 PAPPAQ13219 1627 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 PKD1L3Q7Z443 1732 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 SBF2Q86WG5 1849 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 TP53P04637 393 aaPredicted RBP7.43□□□□□ -1.22
SUDS3-202ENST00000541280 SDHBP21912 280 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 CANXP27824 592 aaKnown RBP7.43□□□□□ -1.22
SUDS3-202ENST00000541280 TM4SF1P30408 202 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 RIPK4P57078 832 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 CORO7P57737 925 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 MVKQ03426 396 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 SSPNQ14714 243 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 TCEAL1Q15170 157 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 MCM10Q7L590 875 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 BRF1Q92994 677 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 RUNDC1Q96C34 613 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 FCRL3Q96P31 734 aaPredicted RBP7.43□□□□□ -1.22
SUDS3-202ENST00000541280 HAUS7Q99871 368 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 CHMP4AQ9BY43 222 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 KLHL25Q9H0H3 589 aa7.43□□□□□ -1.22
SUDS3-202ENST00000541280 KIAA1522Q9P206 1035 aaPredicted RBP7.43□□□□□ -1.22
SUDS3-202ENST00000541280 A0A1W2PQH9 124 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 SRGAP3O43295 1099 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 TMPOP42166 694 aaKnown RBP7.42□□□□□ -1.22
SUDS3-202ENST00000541280 CDR1P51861 262 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 EPHB3P54753 998 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 POU4F1Q01851 419 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 CALD1Q05682 793 aaKnown RBP7.42□□□□□ -1.22
SUDS3-202ENST00000541280 RCSD1Q6JBY9 416 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 CLEC4GQ6UXB4 293 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 TMEM151BQ8IW70 566 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 NAT16Q8N8M0 369 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 NLGN2Q8NFZ4 835 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 SHDQ96IW2 340 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 ZNF652Q9Y2D9 606 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 ZBTB1Q9Y2K1 713 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 IRAK3Q9Y616 596 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 BTAF1O14981 1849 aa7.42□□□□□ -1.22
SUDS3-202ENST00000541280 MAP2P11137 1827 aaKnown RBP7.42□□□□□ -1.22
SUDS3-202ENST00000541280 ANP32CO43423 234 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 CASP7P55210 303 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 RAB3GAP1Q15042 981 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 TCERG1LQ5VWI1 586 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 SMIM5Q71RC9 77 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 MZB1Q8WU39 189 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 KLHL6Q8WZ60 621 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 SEC16BQ96JE7 1060 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 PTCHD1Q96NR3 888 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 TGIF2Q9GZN2 237 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 NOL6Q9H6R4 1146 aaKnown RBP7.41□□□□□ -1.22
SUDS3-202ENST00000541280 EPB41L4AQ9HCS5 686 aaPredicted RBP7.41□□□□□ -1.22
SUDS3-202ENST00000541280 USP16Q9Y5T5 823 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 MRC1P22897 1456 aa7.41□□□□□ -1.22
SUDS3-202ENST00000541280 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.22
SUDS3-202ENST00000541280 A1BGP04217 495 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 MSL3P1P0C860 447 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 IFNGR1P15260 489 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 PI3P19957 117 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 MAPKAPK2P49137 400 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 EIF4A1P60842 406 aaKnown RBP7.4□□□□□ -1.22
SUDS3-202ENST00000541280 SLC7A5Q01650 507 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 DCTN1Q14203 1278 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 NR1I3Q14994 352 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 RPTNQ6XPR3 784 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 LDHDQ86WU2 507 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.22
SUDS3-202ENST00000541280 KRTAP4-9Q9BYQ8 210 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 GBP3Q9H0R5 595 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 FAM86C1Q9NVL1 165 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 SRP68Q9UHB9 627 aaKnown RBP7.4□□□□□ -1.22
SUDS3-202ENST00000541280 TSPYL4Q9UJ04 414 aa7.4□□□□□ -1.22
SUDS3-202ENST00000541280 DOT1LQ8TEK3 1739 aa7.4□□□□□ -1.23
SUDS3-202ENST00000541280 CASZ1Q86V15 1759 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 SHANK3Q9BYB0 1731 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 COL15A1P39059 1388 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 IRS2Q9Y4H2 1338 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 ERVV-1B6SEH8 477 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 AURKAO14965 403 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 KCNQ3O43525 872 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 SERPINB2P05120 415 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 INHBBP09529 407 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 NFIXQ14938 502 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 PLEKHN1Q494U1 663 aaPredicted RBP7.39□□□□□ -1.23
SUDS3-202ENST00000541280 TMC6Q7Z403 805 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 IGDCC3Q8IVU1 814 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 TMEFF1Q8IYR6 380 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 RCC1LQ96I51 464 aaKnown RBP7.39□□□□□ -1.23
SUDS3-202ENST00000541280 PDLIM7Q9NR12 457 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 STRIP2Q9ULQ0 834 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 PCDHA5Q9Y5H7 936 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 SRCAPQ6ZRS2 3230 aa7.39□□□□□ -1.23
SUDS3-202ENST00000541280 RGPD2P0DJD1 1756 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 NUDT19A8MXV4 375 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 H0YIN7 160 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 CHL1O00533 1208 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 TBC1D8O95759 1140 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 CYBBP04839 570 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms