RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 A0A087X0B3 334 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 A0A1W2PQ27 194 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 A0A1W2PQ64 194 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 A0A1W2PQD8 194 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 GSTTP1A0A1W2PQM5 241 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 GOLGA6L4A6NEF3 574 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 GOLGA6L22H0YM25 854 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 INHAP05111 366 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 LIG1P18858 919 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 CMA1P23946 247 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 CNGA1P29973 690 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 ACTR2P61160 394 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 UBE2HP62256 183 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 ECM1Q16610 540 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 DUSP28Q4G0W2 176 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 ARSIQ5FYB1 569 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 MIER3Q7Z3K6 550 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 CTU1Q7Z7A3 348 aaKnown RBP10.5□□□□□ -0.73
DDX55-208ENST00000541259 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
DDX55-208ENST00000541259 FSIP1Q8NA03 581 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 DYDC2Q96IM9 177 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 PLIN2Q99541 437 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 MLXIPQ9HAP2 919 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
DDX55-208ENST00000541259 RGL1Q9NZL6 768 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 NRBP1Q9UHY1 535 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 FAM184BQ9ULE4 1060 aa10.5□□□□□ -0.73
DDX55-208ENST00000541259 GNEQ9Y223 722 aaKnown RBP10.5□□□□□ -0.73
DDX55-208ENST00000541259 LOXHD1Q8IVV2 1947 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 MED24O75448 989 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 GH1P01241 217 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 PFKFB1P16118 471 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 UBA7P41226 1012 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 NDUFA8P51970 172 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 KRT76Q01546 638 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 CYP4A11Q02928 519 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 CTTNQ14247 550 aaKnown RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 KARSQ15046 597 aaKnown RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 EPHA7Q15375 998 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 ZRSR1Q15695 479 aaKnown RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 HSDL1Q3SXM5 330 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 MAP3K21Q5TCX8 1036 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 ZNF746Q6NUN9 644 aaPredicted RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 METTL7BQ6UX53 244 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 ABHD15Q6UXT9 468 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 CABP7Q86V35 215 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 PDILTQ8N807 584 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 GIMAP8Q8ND71 665 aaPredicted RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 OR6J1Q8NGC5 347 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 GPT2Q8TD30 523 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 SNX29Q8TEQ0 813 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 LRRC15Q8TF66 581 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 MRPS27Q92552 414 aaKnown RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 AK8Q96MA6 479 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 PNMA5Q96PV4 448 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 GPR20Q99678 358 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
DDX55-208ENST00000541259 RAB34Q9BZG1 259 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 DISC1Q9NRI5 854 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 HPSEQ9Y251 543 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 EVPLQ92817 2033 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 ARID2Q68CP9 1835 aa10.49□□□□□ -0.73
DDX55-208ENST00000541259 MYH11P35749 1972 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 FAM237AA0A1B0GTK4 181 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 NKRFO15226 690 aaKnown RBP eCLIP10.48□□□□□ -0.73
DDX55-208ENST00000541259 SEPT4O43236 478 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 SLITRK3O94933 977 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 ATG7O95352 703 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 NUDT7P0C024 238 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 AKR1A1P14550 325 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 CCT6AP40227 531 aaKnown RBP10.48□□□□□ -0.73
DDX55-208ENST00000541259 GRB10Q13322 594 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 SNW1Q13573 536 aaKnown RBP10.48□□□□□ -0.73
DDX55-208ENST00000541259 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 UGCGQ16739 394 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 KRT79Q5XKE5 535 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 SWSAP1Q6NVH7 229 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 CATSPER3Q86XQ3 398 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 ENGASEQ8NFI3 743 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 AFG1LQ8WV93 481 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 SPATA33Q96N06 139 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 PCYT2Q99447 389 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 HSD17B14Q9BPX1 270 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 CCSER1Q9C0I3 900 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 FAM13BQ9NYF5 915 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 WRAP73Q9P2S5 460 aaPredicted RBP10.48□□□□□ -0.73
DDX55-208ENST00000541259 KCNH3Q9ULD8 1083 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 PCDHA10Q9Y5I2 948 aa10.48□□□□□ -0.73
DDX55-208ENST00000541259 MYADML2A6NDP7 307 aa10.47□□□□□ -0.73
DDX55-208ENST00000541259 DDX11L8A8MPP1 907 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms