RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 SCG3Q8WXD2 468 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 SUCLG2Q96I99 432 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 CACNA2D2Q9NY47 1150 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 GTSE1Q9NYZ3 720 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 CAPN15O75808 1086 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 MAP4P27816 1152 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 E4F1Q66K89 784 aaPredicted RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 PKN3Q6P5Z2 889 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 KDM4CQ9H3R0 1056 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 MRPL47Q9HD33 250 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 USP17L3A6NCW0 530 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 USP17L4A6NCW7 530 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 LRRC53A6NM62 1247 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 MYO1DO94832 1006 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 CHRNDQ07001 517 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 SYDE2Q5VT97 1194 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 ARMC6Q6NXE6 501 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 BZW1Q7L1Q6 419 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 USP17L1Q7RTZ2 530 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 IFNL3Q8IZI9 196 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 TBC1D19Q8N5T2 526 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 TXLNGQ9NUQ3 528 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 K7ERI5 159 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 RASGRF2O14827 1237 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 ST8SIA6P61647 398 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 GNGT1P63211 74 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 EHHADHQ08426 723 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 TSPYL6Q8N831 410 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 PAWRQ96IZ0 340 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 UPF3AQ9H1J1 476 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 GCNT4Q9P109 453 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 XDHP47989 1333 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 ARHGEF10O15013 1369 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 KBTBD13C9JR72 458 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 SERPINI2O75830 405 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 GUCA1CO95843 209 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 OAS2P29728 719 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 STX19Q8N4C7 294 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 KCTD17Q8N5Z5 321 aa10.76□□□□□ -0.69
TRERF1-205ENST00000541110 ABTB1Q969K4 478 aaPredicted RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 GEMIN8Q9NWZ8 242 aaKnown RBP10.76□□□□□ -0.69
TRERF1-205ENST00000541110 ORC4O43929 436 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 FOSP01100 380 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 MT-ND3P03897 115 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 SCG2P13521 617 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PPP6R3Q5H9R7 873 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 FAM196AQ6ZSG2 479 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 HOMEZQ8IX15 550 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 MMP19Q99542 508 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 SERPINI1Q99574 410 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 OSBPL10Q9BXB5 764 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PCDHA5Q9Y5H7 936 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 GOLGA8KD6RF30 607 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PPP3CCP48454 512 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PHKG1Q16816 387 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 ORAI2Q96SN7 254 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 LGR6Q9HBX8 967 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 STRIP2Q9ULQ0 834 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 EIF2AK4Q9P2K8 1649 aaKnown RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 DNMBPQ6XZF7 1577 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 SLC9A1P19634 815 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 NR2F2P24468 414 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 LONP1P36776 959 aaKnown RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 ZKSCAN8Q15776 578 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 ASPRV1Q53RT3 343 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 ZNF507Q8TCN5 953 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 ASPSCR1Q9BZE9 553 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 CAPN10Q9HC96 672 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 SEL1LQ9UBV2 794 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 JAK2O60674 1132 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 HUS1O60921 280 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 GRIK1P39086 918 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 FAM117BQ6P1L5 589 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 OR8K1Q8NGG5 319 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PRR23AA6NEV1 266 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 DFFAO00273 331 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 IRF1P10914 325 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 AP1B1Q10567 949 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 SURF1Q15526 300 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 SYTL3Q4VX76 610 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 HSP90AA5PQ58FG0 334 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 MFN1Q8IWA4 741 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 CCHCR1Q8TD31 782 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 TRIM54Q9BYV2 358 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 MTIF3Q9H2K0 278 aaKnown RBP10.75□□□□□ -0.69
TRERF1-205ENST00000541110 GIMAP4Q9NUV9 329 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 PCDHB15Q9Y5E8 787 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 BMP3P12645 472 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 C11orf96Q7Z7L8 435 aa10.75□□□□□ -0.69
TRERF1-205ENST00000541110 KIFC3Q9BVG8 833 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms