RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZNF233A6NK53 670 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 USP17L12C9JPN9 530 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 USP17L21D6R901 530 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 PRPF3O43395 683 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 HEXIM1O94992 359 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 MMP10P09238 476 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 EZRP15311 586 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 CXCR5P32302 372 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 GBP2P32456 591 aaPredicted RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 KLK7P49862 253 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 PMS1P54277 932 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 PKN1Q16512 942 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 WLSQ5T9L3 541 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 KRT26Q7Z3Y9 468 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 MAATS1Q7Z4T9 603 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 SULF1Q8IWU6 871 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 NLGN1Q8N2Q7 840 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 RNF169Q8NCN4 708 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 IQCDQ96DY2 449 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 SPAG5Q96R06 1193 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 RBM12Q9NTZ6 932 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 ANAPC4Q9UJX5 808 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 NFU1Q9UMS0 254 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 PCDHA13Q9Y5I0 950 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 MYH10P35580 1976 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 A0A1W2PQJ5 194 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 GJC1P36383 396 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 SCNN1BP51168 640 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 C1QTNF8P60827 252 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 MYO1EQ12965 1108 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 UBE4AQ14139 1066 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 EMC10Q5UCC4 262 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 PARP9Q8IXQ6 854 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 IQCKQ8N0W5 287 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 MREGQ8N565 214 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 CSGALNACT2Q8N6G5 542 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 IFT81Q8WYA0 676 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 CCDC113Q9H0I3 377 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 SYNCQ9H7C4 482 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 GDF3Q9NR23 364 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 TSKSQ9UJT2 592 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 MYO9BQ13459 2157 aa5.71□□□□□ -1.49
PROM1-220ENST00000540805 TNKSO95271 1327 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 ZNF263O14978 683 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 NCK2O43639 380 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 AKR1B10O60218 316 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 GNAT2P19087 354 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 ALDH1B1P30837 517 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 LONP1P36776 959 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 TRAPPC10P48553 1259 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 CARSP49589 748 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 KIF11P52732 1056 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 GUCY2DQ02846 1103 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TAF12Q16514 161 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 CFAP221Q4G0U5 840 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 FIGNQ5HY92 759 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TYW1BQ6NUM6 668 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 SPICE1Q8N0Z3 855 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 PROCA1Q8NCQ7 364 aaPredicted RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 C1orf131Q8NDD1 294 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 ERMNQ8TAM6 284 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 WDR66Q8TBY9 1149 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 WHAMMQ8TF30 809 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 SDR42E1Q8WUS8 393 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 NSUN4Q96CB9 384 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 CYFIP2Q96F07 1278 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 CNOT6LQ96LI5 555 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 GPR101Q96P66 508 aaPredicted RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 NOC4LQ9BVI4 516 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 EPB41L5Q9HCM4 733 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 PPANQ9NQ55 473 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 RBM28Q9NW13 759 aaKnown RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 LMCD1Q9NZU5 365 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 BICDL2A1A5D9 508 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 SERPINB2P05120 415 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 FAM153BP0C7A2 387 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 HPDP32754 393 aaPredicted RBP5.71□□□□□ -1.5
PROM1-220ENST00000540805 GUCY2FP51841 1108 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 AMPD3Q01432 767 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TFAP4Q01664 338 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 ADCY2Q08462 1091 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 SEC23AQ15436 765 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 GNPTABQ3T906 1256 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 FAM153CQ494X1 144 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TTI2Q6NXR4 508 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 PIK3AP1Q6ZUJ8 805 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TRIM74Q86UV6 250 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TRIM73Q86UV7 250 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 TNFRSF25Q93038 417 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 SLC39A2Q9NP94 309 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 RNF14Q9UBS8 474 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 FAM153AQ9UHL3 310 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 CSADQ9Y600 493 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 COMMD10Q9Y6G5 202 aa5.71□□□□□ -1.5
PROM1-220ENST00000540805 A0A1B0GUA9 196 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ESYT3A0FGR9 886 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 RASSF10A6NK89 507 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 NOP56O00567 594 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 PLEKHA8P1O95397 391 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 GLI1P08151 1106 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms