RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TTI2Q6NXR4 508 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 EEPD1Q7L9B9 569 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 NACC1Q96RE7 527 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 SH2D3AQ9BRG2 576 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 SEMA6BQ9H3T3 888 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 TMEM150BA6NC51 233 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 PTGS1P23219 599 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 EDNRBP24530 442 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 HERC4Q5GLZ8 1057 aaPredicted RBP27.29■■□□□ 1.96
TTC3-225ENST00000540756 APTXQ7Z2E3 356 aaKnown RBP27.29■■□□□ 1.96
TTC3-225ENST00000540756 CCDC186Q7Z3E2 898 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 GPRC5AQ8NFJ5 357 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 DHTKD1Q96HY7 919 aaPredicted RBP27.29■■□□□ 1.96
TTC3-225ENST00000540756 SLC45A1Q9Y2W3 748 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 FRMD3A2A2Y4 597 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 KCTD2Q14681 263 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 HS1BP3Q53T59 392 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 C1orf186Q6ZWK4 172 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 CCDC65Q8IXS2 484 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 P2RX5Q93086 422 aa27.29■■□□□ 1.96
TTC3-225ENST00000540756 DUSP9Q99956 384 aaKnown RBP27.29■■□□□ 1.96
TTC3-225ENST00000540756 DNAJC25-GNG10A0A024R161 153 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 SFI1A8K8P3 1242 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 STAM2O75886 525 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 GNPTABQ3T906 1256 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 FAM26FQ5R3K3 315 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 IRF2BP1Q8IU81 584 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 MROH8Q9H579 483 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 ADD3Q9UEY8 706 aaKnown RBP27.28■■□□□ 1.96
TTC3-225ENST00000540756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.28■■□□□ 1.96
TTC3-225ENST00000540756 LRRC37A2A6NM11 1700 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 QARSP47897 775 aaKnown RBP27.28■■□□□ 1.96
TTC3-225ENST00000540756 ZNF157P51786 506 aaPredicted RBP27.28■■□□□ 1.96
TTC3-225ENST00000540756 KRT76Q01546 638 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 ZSWIM4Q9H7M6 989 aa27.28■■□□□ 1.96
TTC3-225ENST00000540756 WDR64B1ANS9 1081 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 MUTP22033 750 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 CCNE1P24864 410 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 PSMD2Q13200 908 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 ARID5BQ14865 1188 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 COBLL1Q53SF7 1204 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.27■■□□□ 1.969e-14■■■□□ 14.6
TTC3-225ENST00000540756 FILIP1Q7Z7B0 1213 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 RASAL3Q86YV0 1011 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 NEK9Q8TD19 979 aa27.27■■□□□ 1.96
TTC3-225ENST00000540756 CASP5P51878 434 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 SAPCD2Q86UD0 394 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 CREBRFQ8IUR6 639 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 KCTD17Q8N5Z5 321 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 TRIM47Q96LD4 638 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 KCNF1Q9H3M0 494 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 JPH1Q9HDC5 661 aaPredicted RBP27.26■■□□□ 1.95
TTC3-225ENST00000540756 COPB2P35606 906 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 JAK3P52333 1124 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 ZNF746Q6NUN9 644 aaPredicted RBP27.26■■□□□ 1.95
TTC3-225ENST00000540756 SFR1Q86XK3 245 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 CDHR1Q96JP9 859 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 SRRTQ9BXP5 876 aaKnown RBP27.26■■□□□ 1.95
TTC3-225ENST00000540756 TCEAL9Q9UHQ7 104 aa27.26■■□□□ 1.95
TTC3-225ENST00000540756 UTP14CQ5TAP6 766 aaKnown RBP27.25■■□□□ 1.95
TTC3-225ENST00000540756 CYFIP1Q7L576 1253 aa27.25■■□□□ 1.95
TTC3-225ENST00000540756 TMC6Q7Z403 805 aa27.25■■□□□ 1.95
TTC3-225ENST00000540756 SHCBP1Q8NEM2 672 aa27.25■■□□□ 1.95
TTC3-225ENST00000540756 SFNP31947 248 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 ICAM3P32942 547 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 CENPPQ6IPU0 288 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 GUF1Q8N442 669 aaKnown RBP27.24■■□□□ 1.95
TTC3-225ENST00000540756 SENP7Q9BQF6 1050 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 SLC9A2Q9UBY0 812 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 PCDHA10Q9Y5I2 948 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 NFASCO94856 1347 aa27.24■■□□□ 1.95
TTC3-225ENST00000540756 GTF3C2Q8WUA4 911 aaPredicted RBP27.24■■□□□ 1.95
TTC3-225ENST00000540756 GOLGA6L6A8MZA4 724 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 ESPNB1AK53 854 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 IGF2BP3O00425 579 aaKnown RBP eCLIP27.23■■□□□ 1.95
TTC3-225ENST00000540756 YWHABP31946 246 aaKnown RBP27.23■■□□□ 1.95
TTC3-225ENST00000540756 ACTR2P61160 394 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 KRT31Q15323 416 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 MYOCDQ8IZQ8 938 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 CSGALNACT2Q8N6G5 542 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 SCFD1Q8WVM8 642 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 GTPBP4Q9BZE4 634 aaKnown RBP27.23■■□□□ 1.95
TTC3-225ENST00000540756 PLXNB2O15031 1838 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 PASKQ96RG2 1323 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 ARHGEF35A5YM69 484 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 KCNJ18B7U540 433 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 TEX33O43247 280 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 ECM2O94769 699 aaPredicted RBP27.23■■□□□ 1.95
TTC3-225ENST00000540756 PSMC5P62195 406 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 LRMPQ12912 555 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 KCNJ12Q14500 433 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 TCP11X2Q5H9J9 407 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 PLA2G4FQ68DD2 849 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 NELFCDQ8IXH7 590 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 GABBR1Q9UBS5 961 aa27.23■■□□□ 1.95
TTC3-225ENST00000540756 LOXHD1Q8IVV2 1947 aa27.22■■□□□ 1.95
TTC3-225ENST00000540756 NKRFO15226 690 aaKnown RBP eCLIP27.22■■□□□ 1.956e-8■■■□□ 18.1
TTC3-225ENST00000540756 CBFA2T2O43439 604 aa27.22■■□□□ 1.95
TTC3-225ENST00000540756 ZNF862O60290 1169 aa27.22■■□□□ 1.95
TTC3-225ENST00000540756 UBA1P22314 1058 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms