RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CYP21A2P08686 494 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 ITGB5P18084 799 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 TCF7P36402 384 aaPredicted RBP8.43□□□□□ -1.06
YBX3-209ENST00000540747 COASYQ13057 564 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 PPFIA1Q13136 1202 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 CLUL1Q15846 466 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 NAALADL2Q58DX5 795 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 UTP14CQ5TAP6 766 aaKnown RBP8.43□□□□□ -1.06
YBX3-209ENST00000540747 USP17L6PQ6QN14 398 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 TSHZ1Q6ZSZ6 1077 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 ADGRD2Q7Z7M1 963 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 CMTR2Q8IYT2 770 aaKnown RBP8.43□□□□□ -1.06
YBX3-209ENST00000540747 EFHBQ8N7U6 833 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 PRSS33Q8NF86 280 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 SPPL3Q8TCT6 385 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 EDAQ92838 391 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 GPRASP2Q96D09 838 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 PCYT2Q99447 389 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 MAP3K14Q99558 947 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 SPZ1Q9BXG8 430 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 RTEL1Q9NZ71 1219 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 CD207Q9UJ71 328 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 SQORQ9Y6N5 450 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 GVINP1Q7Z2Y8 2422 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 KIAA1671Q9BY89 1806 aa8.43□□□□□ -1.06
YBX3-209ENST00000540747 VPS13AQ96RL7 3174 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 DMDP11532 3685 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 GSPT1P15170 499 aaKnown RBP8.42□□□□□ -1.06
YBX3-209ENST00000540747 SMARCA1P28370 1054 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 MRPS6P82932 125 aaKnown RBP8.42□□□□□ -1.06
YBX3-209ENST00000540747 PTH1RQ03431 593 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 BTG3Q14201 252 aaPredicted RBP8.42□□□□□ -1.06
YBX3-209ENST00000540747 GRIK4Q16099 956 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 MB21D2Q8IYB1 491 aaPredicted RBP8.42□□□□□ -1.06
YBX3-209ENST00000540747 GIMAP8Q8ND71 665 aaPredicted RBP8.42□□□□□ -1.06
YBX3-209ENST00000540747 IGDCC4Q8TDY8 1250 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 MFSD14AQ96MC6 490 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 TUBE1Q9UJT0 475 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 UBIAD1Q9Y5Z9 338 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 CDY2AQ9Y6F7 541 aa8.42□□□□□ -1.06
YBX3-209ENST00000540747 IGSF9BQ9UPX0 1349 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 KDM3AQ9Y4C1 1321 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 E7EWF7 191 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 STXBP3O00186 592 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 IFIT3O14879 490 aaKnown RBP8.41□□□□□ -1.06
YBX3-209ENST00000540747 RPLP2P05387 115 aaKnown RBP8.41□□□□□ -1.06
YBX3-209ENST00000540747 CD52P31358 61 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 SP4Q02446 784 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 TCF15Q12870 199 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 WTAPQ15007 396 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 IER5LQ5T953 404 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 B4GALNT3Q6L9W6 998 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 EP400NLQ6ZTU2 488 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 NLRX1Q86UT6 975 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 NPAS4Q8IUM7 802 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 KLHL23Q8NBE8 558 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 VN1R2Q8NFZ6 395 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 ATP8B4Q8TF62 1192 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 DNAJB3Q8WWF6 145 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 SEPT1Q8WYJ6 367 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 SUSD6Q92537 303 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 ZBTB10Q96DT7 871 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 TMX1Q9H3N1 280 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 RWDD1Q9H446 243 aaPredicted RBP8.41□□□□□ -1.06
YBX3-209ENST00000540747 ERAP1Q9NZ08 941 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 CACNA1AO00555 2505 aa8.41□□□□□ -1.06
YBX3-209ENST00000540747 PTPRZ1P23471 2315 aaPredicted RBP8.41□□□□□ -1.06
YBX3-209ENST00000540747 KMT2EQ8IZD2 1858 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 TMEM221A6NGB7 291 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 M0R296 226 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 DDAH1O94760 285 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 INSRRP14616 1297 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 PDE4AP27815 886 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 GATMP50440 423 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 ZXDAP98168 799 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 KCNC3Q14003 757 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.06
YBX3-209ENST00000540747 FAM43BQ6ZT52 329 aaPredicted RBP8.4□□□□□ -1.06
YBX3-209ENST00000540747 RSPH3Q86UC2 560 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 CDHR1Q96JP9 859 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 MTA3Q9BTC8 594 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 FTHL17Q9BXU8 183 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 SMARCAD1Q9H4L7 1026 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 LY9Q9HBG7 655 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 USP15Q9Y4E8 981 aaPredicted RBP8.4□□□□□ -1.06
YBX3-209ENST00000540747 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 U3KPZ7 1027 aaPredicted RBP8.4□□□□□ -1.06
YBX3-209ENST00000540747 KAT6AQ92794 2004 aa8.4□□□□□ -1.06
YBX3-209ENST00000540747 FAM186AA6NE01 2351 aa8.4□□□□□ -1.07
YBX3-209ENST00000540747 ZNF292O60281 2723 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 RRN3P2A6NIE6 340 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 FSCN2O14926 492 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 MGEA5O60502 916 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PLEKHA8P1O95397 391 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 SCG2P13521 617 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms