RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	GBA2	Q9HCG7	927 aa	Predicted RBP	27.57	■■■□□ 2
ARL6IP4-218	ENST00000540708	WRAP73	Q9P2S5	460 aa	Predicted RBP	27.57	■■■□□ 2
ARL6IP4-218	ENST00000540708	TBCA	O75347	108 aa	Known RBP	27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	LRRC63	Q05C16	580 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	ARID5B	Q14865	1188 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	LRRC41	Q15345	812 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	SPECC1L	Q69YQ0	1117 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	KCND2	Q9NZV8	630 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	RBPJL	Q9UBG7	517 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	PNMA3	Q9UL41	463 aa		27.56	■■■□□ 2
ARL6IP4-218	ENST00000540708	WDR64	B1ANS9	1081 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	COPB1	P53618	953 aa	Known RBP	27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	STXBP2	Q15833	593 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	RDM1	Q8NG50	284 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	TSG101	Q99816	390 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	TBC1D7	Q9P0N9	293 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	PYCARD	Q9ULZ3	195 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	COL4A3BP	Q9Y5P4	624 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	LCT	P09848	1927 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	POTEB2	H3BUK9	544 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	N4BP3	O15049	544 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	RGS20	O76081	388 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	ERCC3	P19447	782 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	SFPQ	P23246	707 aa	Known RBP eCLIP	27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	QARS	P47897	775 aa	Known RBP	27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	CNTN2	Q02246	1040 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	C1orf186	Q6ZWK4	172 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	CREBRF	Q8IUR6	639 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	C2orf69	Q8N8R5	385 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	GLIS3	Q8NEA6	775 aa		27.55	■■■□□ 2
ARL6IP4-218	ENST00000540708	LOXHD1	Q8IVV2	1947 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	ZBTB39	O15060	712 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	LYPLA2	O95372	231 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	FGFR1OP	O95684	399 aa	Known RBP	27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	CETP	P11597	493 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	GAP43	P17677	238 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	ALDH5A1	P51649	535 aa	Predicted RBP	27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	ZNF746	Q6NUN9	644 aa	Predicted RBP	27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	KIAA1524	Q8TCG1	905 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	SENP7	Q9BQF6	1050 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	TXNRD2	Q9NNW7	524 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	TAB2	Q9NYJ8	693 aa		27.54	■■■□□ 2
ARL6IP4-218	ENST00000540708	ARHGEF35	A5YM69	484 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	TEX33	O43247	280 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	EIF3J	O75822	258 aa	Known RBP	27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	KCNA2	P16389	499 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	GTF2A2	P52657	109 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	NFASC	O94856	1347 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	SPATA31C2	B4DYI2	1134 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	CCNE2	O96020	404 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	TBX2	Q13207	712 aa	Predicted RBP	27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	ARMCX5	Q6P1M9	558 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	SFR1	Q86XK3	245 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	VPS16	Q9H269	839 aa		27.53	■■■□□ 2
ARL6IP4-218	ENST00000540708	PTPN21	Q16825	1174 aa		27.52	■■■□□ 2
ARL6IP4-218	ENST00000540708	FGFBP2	Q9BYJ0	223 aa		27.52	■■■□□ 2
ARL6IP4-218	ENST00000540708	DBR1	Q9UK59	544 aa	Known RBP	27.52	■■■□□ 2
ARL6IP4-218	ENST00000540708	FAM13A	O94988	1023 aa		27.51	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	CELF2	O95319	508 aa	Known RBP	27.51	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	PBX1	P40424	430 aa		27.51	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	PSMC5	P62195	406 aa		27.51	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	SLC45A1	Q9Y2W3	748 aa		27.51	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	ASTN1	O14525	1302 aa		27.51	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	RSPH10B2	B2RC85	870 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708		B4DLN1	442 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	NRDC	O43847	1150 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	TPM2	P07951	284 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	RSPH10B	P0C881	870 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	ICAM3	P32942	547 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708		Q3C1V9	767 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	C4orf19	Q8IY42	314 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	SMAP1	Q8IYB5	467 aa	Predicted RBP	27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	FAM133A	Q8N9E0	248 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	SCFD1	Q8WVM8	642 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	CNOT6L	Q96LI5	555 aa	Known RBP	27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	MROH8	Q9H579	483 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	ODF2L	Q9ULJ1	636 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	SOWAHB	A6NEL2	793 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	SKIL	P12757	684 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	GUCY2C	P25092	1073 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	CCZ1B	P86790	482 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	CCZ1	P86791	482 aa	Predicted RBP	27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	ZCWPW2	Q504Y3	356 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	MS4A4A	Q96JQ5	239 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	OLFML3	Q9NRN5	406 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	PCDHA10	Q9Y5I2	948 aa		27.5	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	KIAA1217	Q5T5P2	1943 aa		27.49	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	EDNRB	P24530	442 aa		27.49	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	MPHOSPH6	Q99547	160 aa	Known RBP	27.49	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	JPH1	Q9HDC5	661 aa	Predicted RBP	27.49	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	CCL15-CCL14	A0A0B4J2E2	113 aa		27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	ERVK-9	P63128	1117 aa		27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	ERVK-24	P63145	666 aa		27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	KCTD2	Q14681	263 aa		27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	CCL15	Q16663	113 aa		27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	EPM2AIP1	Q7L775	607 aa	Predicted RBP	27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	SHCBP1	Q8NEM2	672 aa		27.48	■■□□□ 1.99
ARL6IP4-218	ENST00000540708	TUBGCP2	Q9BSJ2	902 aa		27.48	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms