RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 FRMPD4Q14CM0 1322 aa10.55□□□□□ -0.72
LCOR-209ENST00000540664 PARP14Q460N5 1801 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 LRRC53A6NM62 1247 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CETN3O15182 167 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CTNND1O60716 968 aaKnown RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 ARP10275 920 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CLCN6P51797 869 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 VAV2P52735 878 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 EPHA7Q15375 998 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 WHAMMP3Q1A5X7 153 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 KRT26Q7Z3Y9 468 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 FRMD5Q7Z6J6 570 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 EHBP1Q8NDI1 1231 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 GOLGA1Q92805 767 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 JAKMIP2Q96AA8 810 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 MXRA8Q9BRK3 442 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 LACRTQ9GZZ8 138 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CEP72Q9P209 647 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CCPG1Q9ULG6 757 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 DOCK1Q14185 1865 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 EIF3DO15371 548 aaKnown RBP eCLIP10.54□□□□□ -0.72
LCOR-209ENST00000540664 KRT86O43790 486 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 GAS7O60861 476 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 PLEKP08567 350 aaPredicted RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 MYBP10242 640 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 NR2F2P24468 414 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 ZNF131P52739 623 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 TUBB4BP68371 445 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 UBXN2AP68543 259 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CTTNQ14247 550 aaKnown RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 NFIL3Q16649 462 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 CCDC122Q5T0U0 273 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 HGSNATQ68CP4 663 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 SLC30A10Q6XR72 485 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 TRAPPC11Q7Z392 1133 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 NEK11Q8NG66 645 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 SMCR8Q8TEV9 937 aaPredicted RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 ZNF577Q9BSK1 485 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 UNC45AQ9H3U1 944 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 TYW1Q9NV66 732 aaKnown RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 MAP3K20Q9NYL2 800 aaKnown RBP10.54□□□□□ -0.72
LCOR-209ENST00000540664 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 GUCA1BQ9UMX6 200 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
LCOR-209ENST00000540664 ASTN1O14525 1302 aa10.54□□□□□ -0.72
LCOR-209ENST00000540664 SSU72P8A0A1W2PR75 194 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 CALUO43852 315 aaPredicted RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 ZRANB2O95218 330 aaKnown RBP eCLIP10.53□□□□□ -0.72
LCOR-209ENST00000540664 ZSCAN20P17040 1043 aaPredicted RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 ITGB5P18084 799 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 PAPD7Q5XG87 772 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 RRAGAQ7L523 313 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 MCF2L2Q86YR7 1114 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 NEK9Q8TD19 979 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 CCDC42Q96M95 316 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 NACC1Q96RE7 527 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 FIZ1Q96SL8 496 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 TSGA10Q9BZW7 698 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 ZHX3Q9H4I2 956 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 BCAS3Q9H6U6 928 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 WRAP73Q9P2S5 460 aaPredicted RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 RBAK-RBAKDNI3L0D1 243 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 FZD9O00144 591 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 IPO5O00410 1097 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 NFIBO00712 420 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 DHX15O43143 795 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 TBCAO75347 108 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 IPO7O95373 1038 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 GMPSP49915 693 aaPredicted RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 KIF11P52732 1056 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 KIAA1328Q86T90 577 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 TPH2Q8IWU9 490 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 NLGN2Q8NFZ4 835 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 PIGOQ8TEQ8 1089 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 TEKT3Q9BXF9 490 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 TANGO6Q9C0B7 1094 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 SEL1LQ9UBV2 794 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 MYO6Q9UM54 1294 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 TFR2Q9UP52 801 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 SCAF8Q9UPN6 1271 aaKnown RBP10.53□□□□□ -0.72
LCOR-209ENST00000540664 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 UBE4BO95155 1302 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 ZMYM2Q9UBW7 1377 aa10.53□□□□□ -0.72
LCOR-209ENST00000540664 ANO9A1A5B4 782 aa10.52□□□□□ -0.73
LCOR-209ENST00000540664 DCAF8L1A6NGE4 600 aa10.52□□□□□ -0.73
LCOR-209ENST00000540664 PJA2O43164 708 aa10.52□□□□□ -0.73
LCOR-209ENST00000540664 TGFB1I1O43294 461 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms