RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SP4Q02446 784 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 ITGB3BPQ13352 177 aaPredicted RBP14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 SEPT8Q92599 483 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 APBB2Q92870 758 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 TOP1MTQ969P6 601 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 ZSWIM6Q9HCJ5 1215 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 INSL6Q9Y581 213 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 TTC3P53804 2025 aa14.97□□□□□ -0.01
SEMA4D-223ENST00000540475 IGLV3-22A0A075B6J6 115 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 RRN3P2A6NIE6 340 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 DHX15O43143 795 aaKnown RBP14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 ACTR2P61160 394 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 PPFIA1Q13136 1202 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 GRIK4Q16099 956 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 SPRED2Q7Z698 418 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 EVPLQ92817 2033 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 PGBD1Q96JS3 809 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 ASB2Q96Q27 587 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 SDF4Q9BRK5 362 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 ZBED2Q9BTP6 218 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 RNF26Q9BY78 433 aaPredicted RBP14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 TM6SF1Q9BZW5 370 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 THEGQ9P2T0 379 aa14.96□□□□□ -0.01
SEMA4D-223ENST00000540475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 LINC01553A4QN01 128 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 FAM86B1E9PN63 330 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 ADAMTS3O15072 1205 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 AMHP03971 560 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 FAM86B2P0C5J1 330 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 IFNAR1P17181 557 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 PDIA3P30101 505 aaKnown RBP14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 SLC26A2P50443 739 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 FGD1P98174 961 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 GRB10Q13322 594 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 CCDC85BQ15834 202 aaPredicted RBP14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 ABHD15Q6UXT9 468 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 RUFY3Q7L099 469 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 CCDC12Q8WUD4 166 aaPredicted RBP14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 PPM1EQ8WY54 764 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 ARNTL2Q8WYA1 636 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 GLG1Q92896 1179 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 TNPO1Q92973 898 aaKnown RBP14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 CERS4Q9HA82 394 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 TUBE1Q9UJT0 475 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 SQORQ9Y6N5 450 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 NCOR1O75376 2440 aa14.95□□□□□ -0.02
SEMA4D-223ENST00000540475 RBAK-RBAKDNI3L0D1 243 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 GTPBP6O43824 516 aaPredicted RBP14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 CTSHP09668 335 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 INSRRP14616 1297 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 GNA11P29992 359 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 CIITAP33076 1130 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 MRPS5P82675 430 aaKnown RBP14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 TOB2Q14106 344 aaPredicted RBP14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 TGS1Q96RS0 853 aaKnown RBP14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 SUGCTQ9HAC7 445 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 C6orf50Q9HD87 102 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 PKD2L1Q9P0L9 805 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 PCDHA2Q9Y5H9 948 aa14.94□□□□□ -0.02
SEMA4D-223ENST00000540475 EDIL3O43854 480 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 CCNE2O96020 404 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 MARK3P27448 753 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 STAT5BP51692 787 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 LPIN1Q14693 890 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 PLCB4Q15147 1175 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 JAKMIP3Q5VZ66 844 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 FAM43BQ6ZT52 329 aaPredicted RBP14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 RSPH3Q86UC2 560 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 DNAJB3Q8WWF6 145 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 PHKBQ93100 1093 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 ZNF274Q96GC6 653 aaPredicted RBP14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 IFIH1Q9BYX4 1025 aaKnown RBP14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 AZI2Q9H6S1 392 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 SH3GLB2Q9NR46 395 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 BDP1A6H8Y1 2624 aa14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 TCF20Q9UGU0 1960 aaKnown RBP14.93□□□□□ -0.02
SEMA4D-223ENST00000540475 ZNF76P36508 570 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 FBXO47Q5MNV8 452 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 PLA2G4DQ86XP0 818 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 MYOCDQ8IZQ8 938 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 REXO1Q8N1G1 1221 aaKnown RBP14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 CRIPAKQ8N1N5 446 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 SAMD11Q96NU1 681 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 TBC1D22BQ9NU19 505 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 NAP1L2Q9ULW6 460 aaPredicted RBP14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
SEMA4D-223ENST00000540475 COL1A2P08123 1366 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 SMIM35A0A1B0GVV1 85 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 IPO5O00410 1097 aaKnown RBP14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 ENPP3O14638 875 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 BMP1P13497 986 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 MRPS6P82932 125 aaKnown RBP14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 SETQ01105 290 aaPredicted RBP14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 IER5Q5VY09 327 aa14.91□□□□□ -0.02
SEMA4D-223ENST00000540475 KRT40Q6A162 431 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms