RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 DBF4BQ8NFT6 615 aa10.27□□□□□ -0.77
LMO3-222ENST00000540445 LMBR1Q8WVP7 490 aa10.27□□□□□ -0.77
LMO3-222ENST00000540445 SEPT8Q92599 483 aa10.27□□□□□ -0.77
LMO3-222ENST00000540445 TNPO1Q92973 898 aaKnown RBP10.27□□□□□ -0.77
LMO3-222ENST00000540445 UIMC1Q96RL1 719 aa10.27□□□□□ -0.77
LMO3-222ENST00000540445 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
LMO3-222ENST00000540445 ZMYND12Q9H0C1 365 aa10.27□□□□□ -0.77
LMO3-222ENST00000540445 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
LMO3-222ENST00000540445 COL4A6Q14031 1691 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 LCHNA4D1U4 455 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 RFXAPO00287 272 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 MEIS1O00470 390 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 CPLX1O14810 134 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 CAND2O75155 1236 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 AMHP03971 560 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 SREBF1P36956 1147 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 STAT5BP51692 787 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 ACTR2P61160 394 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 STK3Q13188 491 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 GRIK4Q16099 956 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 PKN1Q16512 942 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 TJAP1Q5JTD0 557 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 MCTP2Q6DN12 878 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 SPRED2Q7Z698 418 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 RSPH3Q86UC2 560 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 PLA2G4DQ86XP0 818 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 TRIM22Q8IYM9 498 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 REXO1Q8N1G1 1221 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 MICALL1Q8N3F8 863 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 BICD2Q8TD16 824 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 ARNTL2Q8WYA1 636 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 RNF26Q9BY78 433 aaPredicted RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 AGXT2Q9BYV1 514 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 UPF3BQ9BZI7 483 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 NCOA5Q9HCD5 579 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 AGO4Q9HCK5 861 aaKnown RBP10.26□□□□□ -0.77
LMO3-222ENST00000540445 THEGQ9P2T0 379 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 TRPC6Q9Y210 931 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 NFASCO94856 1347 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 TTC3P53804 2025 aa10.26□□□□□ -0.77
LMO3-222ENST00000540445 ESYT2A0FGR8 921 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 RRN3P2A6NIE6 340 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 BACH1O14867 736 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
LMO3-222ENST00000540445 UPP2O95045 317 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 GJB5O95377 273 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 INSRRP14616 1297 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 IFNAR1P17181 557 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 NLRP5P59047 1200 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 TOB2Q14106 344 aaPredicted RBP10.25□□□□□ -0.77
LMO3-222ENST00000540445 NTRK3Q16288 839 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 PLEKHG4Q58EX7 1191 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 TAF2Q6P1X5 1199 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
LMO3-222ENST00000540445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.25□□□□□ -0.77
LMO3-222ENST00000540445 MYOCDQ8IZQ8 938 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 CCDC148Q8NFR7 591 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 DNAJB3Q8WWF6 145 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 ZNF274Q96GC6 653 aaPredicted RBP10.25□□□□□ -0.77
LMO3-222ENST00000540445 RAD9AQ99638 391 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 OSBPL7Q9BZF2 842 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 TSPYL2Q9H2G4 693 aaPredicted RBP10.25□□□□□ -0.77
LMO3-222ENST00000540445 PDRG1Q9NUG6 133 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 VPS54Q9P1Q0 977 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 TUBE1Q9UJT0 475 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 KIAA1671Q9BY89 1806 aa10.25□□□□□ -0.77
LMO3-222ENST00000540445 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 FAM86B1E9PN63 330 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 IPO5O00410 1097 aaKnown RBP10.24□□□□□ -0.77
LMO3-222ENST00000540445 LPXNO60711 386 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 CHRNA1P02708 482 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 CYP3A4P08684 503 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 FAM86B2P0C5J1 330 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 EVCP57679 992 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 ITGB3BPQ13352 177 aaPredicted RBP10.24□□□□□ -0.77
LMO3-222ENST00000540445 SKIV2LQ15477 1246 aaKnown RBP10.24□□□□□ -0.77
LMO3-222ENST00000540445 PRR16Q569H4 304 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 ERICH6BQ5W0A0 696 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 FAM160B1Q5W0V3 765 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 RUFY4Q6ZNE9 571 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 NIPA1Q7RTP0 329 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 PLPPR4Q7Z2D5 763 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 TRMT1LQ7Z2T5 733 aaKnown RBP10.24□□□□□ -0.77
LMO3-222ENST00000540445 CKAP2LQ8IYA6 745 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 RASGRP4Q8TDF6 673 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 ASB2Q96Q27 587 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 PCYT2Q99447 389 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 ZNF577Q9BSK1 485 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 IFIH1Q9BYX4 1025 aaKnown RBP10.24□□□□□ -0.77
LMO3-222ENST00000540445 TM6SF1Q9BZW5 370 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 FAM49AQ9H0Q0 323 aaPredicted RBP10.24□□□□□ -0.77
LMO3-222ENST00000540445 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
LMO3-222ENST00000540445 INSL6Q9Y581 213 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms