RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SGMS1Q86VZ5 419 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 CLP1Q92989 425 aaKnown RBP13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 PCDHA6Q9UN73 950 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 PCDHA8Q9Y5H6 950 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 ALADP13716 330 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 RXRAP19793 462 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 MARK3P27448 753 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 CTNNB1P35222 781 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 NECTIN1Q15223 517 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 UBE2SQ16763 222 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 IER5Q5VY09 327 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 CREB3L3Q68CJ9 461 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 CMTR1Q8N1G2 835 aaKnown RBP13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 PLVAPQ9BX97 442 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 FTHL17Q9BXU8 183 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 JPH1Q9HDC5 661 aaPredicted RBP13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 SLC9A2Q9UBY0 812 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 PRKAG3Q9UGI9 489 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 CDY2AQ9Y6F7 541 aa13.75□□□□□ -0.21
CBX3P4-202ENST00000540428 NFASCO94856 1347 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 H3BQ06 376 aaPredicted RBP13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 DGKIO75912 1065 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 INSRRP14616 1297 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 SSTR3P32745 418 aaPredicted RBP13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 MRPS6P82932 125 aaKnown RBP13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 PCYT2Q99447 389 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 MXRA8Q9BRK3 442 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 ESYT1Q9BSJ8 1104 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 AZI2Q9H6S1 392 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 KCNH7Q9NS40 1196 aa13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
CBX3P4-202ENST00000540428 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 PRR33A8MZF0 331 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 hCG_1984214I3L0E3 225 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 M0QZ92 97 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 FOSP01100 380 aaPredicted RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 COL9A3Q14050 684 aaPredicted RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 BTG3Q14201 252 aaPredicted RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 CTC1Q2NKJ3 1217 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 NAALADL2Q58DX5 795 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 MICU3Q86XE3 530 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 CMTR2Q8IYT2 770 aaKnown RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 NME8Q8N427 588 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 CCDC82Q8N4S0 544 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 ZNF713Q8N859 430 aaPredicted RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 P2RX5Q93086 422 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 SDF4Q9BRK5 362 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 CLDND1Q9NY35 253 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 PCDHA2Q9Y5H9 948 aa13.73□□□□□ -0.21
CBX3P4-202ENST00000540428 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 FAM86C2PA6NEL3 165 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 GRM6O15303 877 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 MMP1P03956 469 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 SLC26A2P50443 739 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 ACTR2P61160 394 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 IGBP1P78318 339 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 APOA5Q6Q788 366 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 RAB11FIP4Q86YS3 637 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 NPAS4Q8IUM7 802 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 LINC01599Q8WXQ3 324 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 TRPV2Q9Y5S1 764 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
CBX3P4-202ENST00000540428 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 SMIM35A0A1B0GVV1 85 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 DCXO43602 365 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 ATG7O95352 703 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 STAG3L1P0CL83 205 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 CD52P31358 61 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 LTBRP36941 435 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 STAT5BP51692 787 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 NAPAP54920 295 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 ZP2Q05996 745 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 AP3B2Q13367 1082 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 PLCB4Q15147 1175 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 WWC2Q6AWC2 1192 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
CBX3P4-202ENST00000540428 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms