RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 P2RX7Q99572 595 aaKnown RBP13.66□□□□□ -0.22
NEK6-213ENST00000540326 DHX36Q9H2U1 1008 aaKnown RBP13.66□□□□□ -0.22
NEK6-213ENST00000540326 AIPL1Q9NZN9 384 aa13.66□□□□□ -0.22
NEK6-213ENST00000540326 HDAC9Q9UKV0 1011 aa13.66□□□□□ -0.22
NEK6-213ENST00000540326 MYH4Q9Y623 1939 aa13.66□□□□□ -0.22
NEK6-213ENST00000540326 CCT5P48643 541 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 GNGT1P63211 74 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 TCP10Q12799 353 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 GLE1Q53GS7 698 aaKnown RBP13.65□□□□□ -0.22
NEK6-213ENST00000540326 CCDC43Q96MW1 224 aaKnown RBP13.65□□□□□ -0.22
NEK6-213ENST00000540326 BCAS3Q9H6U6 928 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 USP21Q9UK80 565 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
NEK6-213ENST00000540326 TNFRSF8P28908 595 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 DDR1Q08345 913 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
NEK6-213ENST00000540326 DCAF17Q5H9S7 520 aaPredicted RBP13.65□□□□□ -0.22
NEK6-213ENST00000540326 ALS2CLQ60I27 953 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 KLHL7Q8IXQ5 586 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 BCAS4Q8TDM0 211 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 SPAG5Q96R06 1193 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 GDF3Q9NR23 364 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 RNF14Q9UBS8 474 aa13.65□□□□□ -0.22
NEK6-213ENST00000540326 MEIS2O14770 477 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 HLA-DOAP06340 250 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 EEF2P13639 858 aaKnown RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 HOXD13P35453 343 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 USP11P51784 963 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 GIT2Q14161 759 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 USH1GQ495M9 461 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 SFR1Q86XK3 245 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 REEP2Q9BRK0 252 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 PCDHAC2Q9Y5I4 1007 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 FRMD3A2A2Y4 597 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 KCNK3O14649 394 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 MYBP10242 640 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 UCHL3P15374 230 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 HOXA10P31260 410 aaPredicted RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 ARHGAP4P98171 946 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 SPIRE1Q08AE8 756 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 APOBEC3HQ6NTF7 200 aaKnown RBP13.64□□□□□ -0.23
NEK6-213ENST00000540326 IRF2BP2Q7Z5L9 587 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 ADAMTSL1Q8N6G6 1762 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 CASKIN2Q8WXE0 1202 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
NEK6-213ENST00000540326 LY75O60449 1722 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 RSPH10B2B2RC85 870 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 RAD51CO43502 376 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 RSPH10BP0C881 870 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 CORO7P57737 925 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 NNTQ13423 1086 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 PROCA1Q8NCQ7 364 aaPredicted RBP13.63□□□□□ -0.23
NEK6-213ENST00000540326 ETNPPLQ8TBG4 499 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
NEK6-213ENST00000540326 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 ZNF233A6NK53 670 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 EIF3HO15372 352 aaKnown RBP eCLIP13.63□□□□□ -0.23
NEK6-213ENST00000540326 AKAP3O75969 853 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 SPATA31C1P0DKV0 1188 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 EPB41P11171 864 aaKnown RBP13.63□□□□□ -0.23
NEK6-213ENST00000540326 ADRA2BP18089 450 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 KCNA1Q09470 495 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 PAK2Q13177 524 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 EXOC3L4Q17RC7 722 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 KNOP1Q1ED39 458 aaKnown RBP13.63□□□□□ -0.23
NEK6-213ENST00000540326 CFAP58Q5T655 872 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 SLFN13Q68D06 897 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 ZC3H3Q8IXZ2 948 aaKnown RBP13.63□□□□□ -0.23
NEK6-213ENST00000540326 USP38Q8NB14 1042 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
NEK6-213ENST00000540326 CRAMP1Q96RY5 1269 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 DNM3Q9UQ16 869 aa13.63□□□□□ -0.23
NEK6-213ENST00000540326 CYP3A7-CYP3A51PA0A087WV96 503 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 FAM86B1E9PN63 330 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 CLIC2O15247 247 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 AFPP02771 609 aaKnown RBP13.62□□□□□ -0.23
NEK6-213ENST00000540326 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 XRCC5P13010 732 aaKnown RBP13.62□□□□□ -0.23
NEK6-213ENST00000540326 CYP3A7P24462 503 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 PON1P27169 355 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 MAGEA9P43362 315 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 CASP4P49662 377 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 PDCLQ13371 301 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 RPS6KA1Q15418 735 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 DPY19L2P1Q6NXN4 242 aa13.62□□□□□ -0.23
NEK6-213ENST00000540326 IQCKQ8N0W5 287 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms