RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CDC25AP30304 524 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 TNNC1P63316 161 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 NFIAQ12857 509 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 PAK1Q13153 545 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CRHR2Q13324 411 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 KRT71Q3SY84 523 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CYB5R4Q7L1T6 521 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CYFIP2Q96F07 1278 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ZIM3Q96PE6 472 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 FAM167BQ9BTA0 163 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 NOD2Q9HC29 1040 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 HEXIM1O94992 359 aaKnown RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 DEXIO95424 95 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ANTXR2P58335 489 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CACNA2D4Q7Z3S7 1137 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CUL5Q93034 780 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 TRIM4Q9C037 500 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 RNF41Q9H4P4 317 aaPredicted RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 RMND1Q9NWS8 449 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 TLDC2A0PJX2 215 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 SH2B2O14492 632 aaPredicted RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 SKOR1P84550 965 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 LRRC23Q53EV4 343 aaPredicted RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 NCAPG2Q86XI2 1143 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 TMTC2Q8N394 836 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ANKRD13CQ8N6S4 541 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 P3H4Q92791 437 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ATP6V1G3Q96LB4 118 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CHP1Q99653 195 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 IFIH1Q9BYX4 1025 aaKnown RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 SPC25Q9HBM1 224 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 STX8Q9UNK0 236 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 SALL1Q9NSC2 1324 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 ZNF831Q5JPB2 1677 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 ANO9A1A5B4 782 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 HIP1RO75146 1068 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 CYP2B6P20813 491 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 CASP1P29466 404 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 RANBP1P43487 201 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 NLRP5P59047 1200 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 TBC1D8BQ0IIM8 1120 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 MORC3Q14149 939 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 TAF11Q15544 211 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 FAXDC2Q96IV6 333 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 CSRNP2Q9H175 543 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 PCDHB6Q9Y5E3 794 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 SCN7AQ01118 1682 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 SPDYE5A6NIY4 337 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 TSPY2A6NKD2 308 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 EIF4E1BA6NMX2 242 aaKnown RBP9.49□□□□□ -0.89
DDB1-217ENST00000540166 FLOT1O75955 427 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 GYPCP04921 128 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 KDM7AQ6ZMT4 941 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 TBC1D10CQ8IV04 446 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 SH3RF3Q8TEJ3 882 aaPredicted RBP9.49□□□□□ -0.89
DDB1-217ENST00000540166 BLZF1Q9H2G9 400 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 ZSWIM5Q9P217 1185 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 ADD3Q9UEY8 706 aaKnown RBP9.49□□□□□ -0.89
DDB1-217ENST00000540166 DIAPH2O60879 1101 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 GH2P01242 217 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 TSPY3P0CV98 308 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 TSPY8P0CW00 308 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 MYBL2P10244 700 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 PDE6AP16499 860 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
DDB1-217ENST00000540166 CYP27A1Q02318 531 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 KRT31Q15323 416 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 FAM133BQ5BKY9 247 aaKnown RBP9.49□□□□□ -0.89
DDB1-217ENST00000540166 MFSD14CQ5VZR4 134 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 CATIPQ7Z7H3 387 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 KLHL7Q8IXQ5 586 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 SPATA4Q8NEY3 305 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 MPHOSPH6Q99547 160 aaKnown RBP9.49□□□□□ -0.89
DDB1-217ENST00000540166 VPS54Q9P1Q0 977 aa9.49□□□□□ -0.89
DDB1-217ENST00000540166 MYPNQ86TC9 1320 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 ATXN2Q99700 1313 aaKnown RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 BACH1O14867 736 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 PRPHP41219 470 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 PRMT2P55345 433 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 APOBEC3HQ6NTF7 200 aaKnown RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 NELFBQ8WX92 580 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 NUDT12Q9BQG2 462 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 SENP2Q9HC62 589 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 KLHL33A6NCF5 533 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 PSMA7O14818 248 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 ANP32DO95626 131 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 ZNF18P17022 549 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 DYNLL1P63167 89 aaKnown RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 PPARAQ07869 468 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 IFNL3Q8IZI9 196 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 LBHD1Q9BQE6 289 aaPredicted RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 VCXQ9H320 206 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms