RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 IGKV5-2P06315 115 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 P4HBP07237 508 aaKnown RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 HOXB7P09629 217 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 MRE11P49959 708 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 RIPK4P57078 832 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 PTPN11Q06124 597 aaPredicted RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 NKPD1Q17RQ9 610 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 FAM110CQ1W6H9 321 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 PCNX4Q63HM2 1172 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 ALG1LQ6GMV1 187 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 GADL1Q6ZQY3 521 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 ERICH6Q7L0X2 663 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 FASTKD5Q7L8L6 764 aaKnown RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 ATG4DQ86TL0 474 aaPredicted RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 TDRD7Q8NHU6 1098 aaKnown RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 SMCR8Q8TEV9 937 aaPredicted RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 BADQ92934 168 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 C12orf49Q9H741 205 aa4.98□□□□□ -1.61
C2CD3-214ENST00000540057 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 RPAP1Q9BWH6 1393 aaPredicted RBP4.98□□□□□ -1.61
C2CD3-214ENST00000540057 MAPK8IP3Q9UPT6 1336 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 PHIPQ8WWQ0 1821 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 RLFQ13129 1914 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 NCOR1O75376 2440 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 GIPC1O14908 333 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 CSF1RP07333 972 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 USP17L7P0C7H9 530 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 CYP2B6P20813 491 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 CCND3P30281 292 aaPredicted RBP4.97□□□□□ -1.61
C2CD3-214ENST00000540057 RTP1P59025 263 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 CACNB2Q08289 660 aaPredicted RBP4.97□□□□□ -1.61
C2CD3-214ENST00000540057 FZD5Q13467 585 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 INPP5AQ14642 412 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 TMEM31Q5JXX7 168 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 AKNAD1Q5T1N1 836 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 FKBP1CQ5VVH2 108 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 SCARA3Q6AZY7 606 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 LRFN4Q6PJG9 635 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 ZSCAN29Q8IWY8 852 aaPredicted RBP4.97□□□□□ -1.61
C2CD3-214ENST00000540057 P2RX7Q99572 595 aaKnown RBP4.97□□□□□ -1.61
C2CD3-214ENST00000540057 FBRSQ9HAH7 460 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 LAS1LQ9Y4W2 734 aaKnown RBP4.97□□□□□ -1.61
C2CD3-214ENST00000540057 AFG3L2Q9Y4W6 797 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 SAMM50Q9Y512 469 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 SNX11Q9Y5W9 270 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 ZHX2Q9Y6X8 837 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 MYO9BQ13459 2157 aa4.97□□□□□ -1.61
C2CD3-214ENST00000540057 BIN1O00499 593 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 TMPOP42166 694 aaKnown RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 GYG1P46976 350 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 EPHB4P54760 987 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 HDLBPQ00341 1268 aaKnown RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 KCNA1Q09470 495 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 LRRC14Q15048 493 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 CCDC85BQ15834 202 aaPredicted RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 CWF19L2Q2TBE0 894 aaKnown RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 APOBEC3HQ6NTF7 200 aaKnown RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 ARMCX6Q7L4S7 300 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 UBE3BQ7Z3V4 1068 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 SCYL3Q8IZE3 742 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PI4K2BQ8TCG2 481 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 FAM151AQ8WW52 585 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 FAM168AQ92567 244 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 TEKT1Q969V4 418 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 RNPC3Q96LT9 517 aaKnown RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 ZDHHC15Q96MV8 337 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PLA2G12BQ9BX93 195 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PNNQ9H307 717 aaKnown RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PRDM7Q9NQW5 492 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PRDM5Q9NQX1 630 aaPredicted RBP4.96□□□□□ -1.62
C2CD3-214ENST00000540057 TMOD2Q9NZR1 351 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 FAM8A1Q9UBU6 413 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PCDHA4Q9UN74 947 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 CYP8B1Q9UNU6 501 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 AGTPBP1Q9UPW5 1226 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 ATP11BQ9Y2G3 1177 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 MAP3K2Q9Y2U5 619 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 PLXNA1Q9UIW2 1896 aa4.96□□□□□ -1.62
C2CD3-214ENST00000540057 REV3LO60673 3130 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 MUC6Q6W4X9 2439 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-214ENST00000540057 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-214ENST00000540057 ANKRD18BA2A2Z9 1011 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 TRIM43BA6NCK2 446 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 FAM86C2PA6NEL3 165 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 PLIN1O60240 522 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 HIBADHP31937 336 aaKnown RBP4.95□□□□□ -1.62
C2CD3-214ENST00000540057 CDK8P49336 464 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 CASP7P55210 303 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 LMOD3Q0VAK6 560 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 TCP10Q12799 353 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 SLBPQ14493 270 aaKnown RBP eCLIP4.95□□□□□ -1.62
C2CD3-214ENST00000540057 CCL14Q16627 93 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 TREML2Q5T2D2 321 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-214ENST00000540057 SLC23A3Q6PIS1 610 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 SLC39A5Q6ZMH5 540 aa4.95□□□□□ -1.62
C2CD3-214ENST00000540057 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-214ENST00000540057 CYFIP1Q7L576 1253 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms