RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PPFIA1Q13136 1202 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 IKBKEQ14164 716 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 GRIK4Q16099 956 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.12■□□□□ 0.653e-18■■■■□ 24.6
DDB1-215ENST00000539712 REXO1Q8N1G1 1221 aaKnown RBP19.12■□□□□ 0.65
DDB1-215ENST00000539712 RASGRP4Q8TDF6 673 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 GLG1Q92896 1179 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 ZBTB10Q96DT7 871 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 ZNF274Q96GC6 653 aaPredicted RBP19.12■□□□□ 0.65
DDB1-215ENST00000539712 C6orf50Q9HD87 102 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 VPS54Q9P1Q0 977 aa19.12■□□□□ 0.65
DDB1-215ENST00000539712 TTC28Q96AY4 2481 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 IGKV6D-21A0A0A0MT36 114 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 RFXAPO00287 272 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 DLL1O00548 723 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 CCDC12Q8WUD4 166 aaPredicted RBP19.11■□□□□ 0.65
DDB1-215ENST00000539712 GAS2L1Q99501 681 aaPredicted RBP19.11■□□□□ 0.65
DDB1-215ENST00000539712 SDF4Q9BRK5 362 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 KAT6AQ92794 2004 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 MUC3AQ02505 3323 aa19.11■□□□□ 0.65
DDB1-215ENST00000539712 TLL1O43897 1013 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 GJB5O95377 273 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 INSRRP14616 1297 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 GNA11P29992 359 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 MGAT3Q09327 533 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 PLCB4Q15147 1175 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 ABHD15Q6UXT9 468 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 PLPPR4Q7Z2D5 763 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 PLA2G4DQ86XP0 818 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 LENG9Q96B70 501 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 CERS4Q9HA82 394 aa19.1■□□□□ 0.65
DDB1-215ENST00000539712 KIF28PB7ZC32 967 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 EFCAB14O75071 495 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 CIITAP33076 1130 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 ZNF76P36508 570 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 STAT5BP51692 787 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 AKAP17AQ02040 695 aaKnown RBP19.09■□□□□ 0.65
DDB1-215ENST00000539712 NPY5RQ15761 445 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 MCTP2Q6DN12 878 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 TAF2Q6P1X5 1199 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 PRDM6Q9NQX0 595 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 SH3GLB2Q9NR46 395 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 PDRG1Q9NUG6 133 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 TUBE1Q9UJT0 475 aa19.09■□□□□ 0.65
DDB1-215ENST00000539712 PRRC2BQ5JSZ5 2229 aaKnown RBP19.08■□□□□ 0.65
DDB1-215ENST00000539712 IPO5O00410 1097 aaKnown RBP19.08■□□□□ 0.64
DDB1-215ENST00000539712 POU3F3P20264 500 aaPredicted RBP19.08■□□□□ 0.64
DDB1-215ENST00000539712 TRAPPC12Q8WVT3 735 aa19.08■□□□□ 0.64
DDB1-215ENST00000539712 DNAJB3Q8WWF6 145 aa19.08■□□□□ 0.64
DDB1-215ENST00000539712 IL17RAQ96F46 866 aa19.08■□□□□ 0.64
DDB1-215ENST00000539712 AIFM3Q96NN9 605 aa19.08■□□□□ 0.64
DDB1-215ENST00000539712 RAD9AQ99638 391 aa19.08■□□□□ 0.64
DDB1-215ENST00000539712 MICAL3Q7RTP6 2002 aa19.08■□□□□ 0.64
DDB1-215ENST00000539712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.07■□□□□ 0.64
DDB1-215ENST00000539712 RRN3P2A6NIE6 340 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 M0R2N6 131 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 DDX39AO00148 427 aaKnown RBP19.07■□□□□ 0.64
DDB1-215ENST00000539712 ATP4AP20648 1035 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 IGFBP4P22692 258 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 IGBP1P78318 339 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 STK3Q13188 491 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 CCDC60Q8IWA6 550 aaPredicted RBP19.07■□□□□ 0.64
DDB1-215ENST00000539712 CCDC148Q8NFR7 591 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 BICD2Q8TD16 824 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 SEPT8Q92599 483 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 COL25A1Q9BXS0 654 aaPredicted RBP19.07■□□□□ 0.64
DDB1-215ENST00000539712 AZI2Q9H6S1 392 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 SIP14410 1827 aa19.07■□□□□ 0.64
DDB1-215ENST00000539712 LPXNO60711 386 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 HTRA4P83105 476 aaPredicted RBP19.06■□□□□ 0.64
DDB1-215ENST00000539712 SSRP1Q08945 709 aaKnown RBP19.06■□□□□ 0.64
DDB1-215ENST00000539712 LPIN1Q14693 890 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 PRR16Q569H4 304 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 PPM1EQ8WY54 764 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 ARNTL2Q8WYA1 636 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 ZNF577Q9BSK1 485 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 ZBED2Q9BTP6 218 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 TPCN1Q9ULQ1 816 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 MTCH2Q9Y6C9 303 aa19.06■□□□□ 0.64
DDB1-215ENST00000539712 POTEB3A0JP26 581 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 ZBTB42B2RXF5 422 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 DTNBO60941 627 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 DEXIO95424 95 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 ANAPC15P60006 121 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 SCRN1Q12765 414 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 CCDC85BQ15834 202 aaPredicted RBP19.05■□□□□ 0.64
DDB1-215ENST00000539712 KRT40Q6A162 431 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 FAM117BQ6P1L5 589 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 POTEBQ6S5H4 581 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 TOP1MTQ969P6 601 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 IFIH1Q9BYX4 1025 aaKnown RBP19.05■□□□□ 0.64
DDB1-215ENST00000539712 PCDHA4Q9UN74 947 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 TRPC6Q9Y210 931 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 PCDHA2Q9Y5H9 948 aa19.05■□□□□ 0.64
DDB1-215ENST00000539712 LINC01553A4QN01 128 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 AMHP03971 560 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 GHRP10912 638 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 SLC26A2P50443 739 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms