RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PABPC4Q13310 644 aaKnown RBP eCLIP18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 MOGSQ13724 837 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 CNNM4Q6P4Q7 775 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 KIAA0895Q8NCT3 520 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 DYDC2Q96IM9 177 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 POLR3CQ9BUI4 534 aaPredicted RBP18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 TEKT3Q9BXF9 490 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 ASCC2Q9H1I8 757 aaPredicted RBP18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 DNM3Q9UQ16 869 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 STK24Q9Y6E0 443 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 RAD51AP2Q09MP3 1159 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 ITGB3BPQ13352 177 aaPredicted RBP18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 MTMR1Q13613 665 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 B3GNT9Q6UX72 402 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 NIPA1Q7RTP0 329 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 AGO4Q9HCK5 861 aaKnown RBP18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 DHX15O43143 795 aaKnown RBP18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 CYP11B2P19099 503 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 CACNB1Q02641 598 aaPredicted RBP18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 TBX2Q13207 712 aaPredicted RBP18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 ARSHQ5FYA8 562 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 TPH2Q8IWU9 490 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 RIT2Q99578 217 aa18.95■□□□□ 0.62
PCDHB17P-201ENST00000539533 NR3C2P08235 984 aa18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 TPM1P09493 284 aa18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 CDKAL1Q5VV42 579 aa18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 VSIG10LQ86VR7 867 aa18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 SLC10A4Q96EP9 437 aa18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 BAG1Q99933 345 aaPredicted RBP18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 BMP2KQ9NSY1 1161 aaPredicted RBP18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 AGTPBP1Q9UPW5 1226 aa18.94■□□□□ 0.62
PCDHB17P-201ENST00000539533 TESPA1A2RU30 521 aaPredicted RBP18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 ZBTB39O15060 712 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 EHHADHQ08426 723 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 STIM1Q13586 685 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 PIGOQ8TEQ8 1089 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 PAGR1Q9BTK6 254 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 PSMA7O14818 248 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 ATP9AO75110 1047 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 HERVK_113P62684 666 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 SYT2Q8N9I0 419 aaPredicted RBP18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 NSUN6Q8TEA1 469 aaKnown RBP18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 BHMT2Q9H2M3 363 aa18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 WRAP73Q9P2S5 460 aaPredicted RBP18.93■□□□□ 0.62
PCDHB17P-201ENST00000539533 GOLGA6L9A6NEM1 432 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 CYP2C19P33261 490 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 APTXQ7Z2E3 356 aaKnown RBP18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 MB21D1Q8N884 522 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 GLIS3Q8NEA6 775 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 CHST13Q8NET6 341 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 IPO4Q8TEX9 1081 aaKnown RBP18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 DHTKD1Q96HY7 919 aaPredicted RBP18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 SPATC1LQ9H0A9 340 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 R3HDMLQ9H3Y0 253 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 TUFT1Q9NNX1 390 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 PANK4Q9NVE7 773 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 TULP2O00295 520 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 CCND2P30279 289 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 COASYQ13057 564 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 EPHA7Q15375 998 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 GPAT2Q6NUI2 795 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 RIOX2Q8IUF8 465 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 ANKRD35Q8N283 1001 aa18.92■□□□□ 0.62
PCDHB17P-201ENST00000539533 STX10O60499 249 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 CNMDO75829 334 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 CAPN2P17655 700 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 CASQ1P31415 396 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 GNG11P61952 73 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 BANK1Q8NDB2 785 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 WDR24Q96S15 920 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 A0A0G2JMZ2 1700 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 KRT18P05783 430 aaKnown RBP18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 CNTN2Q02246 1040 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 LRRC41Q15345 812 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 SPECC1LQ69YQ0 1117 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 TTI2Q6NXR4 508 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 FASTKD5Q7L8L6 764 aaKnown RBP18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 NCAPG2Q86XI2 1143 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 TC2NQ8N9U0 490 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 TXNRD2Q9NNW7 524 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 TBC1D7Q9P0N9 293 aa18.91■□□□□ 0.62
PCDHB17P-201ENST00000539533 RGS20O76081 388 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 SEC31AO94979 1220 aaKnown RBP18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 EYA4O95677 639 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 ANKRD40Q6AI12 368 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 TOGARAM2Q6ZUX3 1019 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 MIER3Q7Z3K6 550 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 P2RX5Q93086 422 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 EEF2KMTQ96G04 330 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 POLD4Q9HCU8 107 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 ATP8B1O43520 1251 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 CCNE1P24864 410 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 SLC20A2Q08357 652 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 MKRN3Q13064 507 aaKnown RBP18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 SNAPC2Q13487 334 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 GIT2Q14161 759 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 COBLL1Q53SF7 1204 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 XRRA1Q6P2D8 792 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms