RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 WDR48Q8TAF3 677 aa9.06□□□□□ -0.96
TRAV11-201ENST00000539512 CPA5Q8WXQ8 436 aa9.06□□□□□ -0.96
TRAV11-201ENST00000539512 DLG3Q92796 817 aa9.06□□□□□ -0.96
TRAV11-201ENST00000539512 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
TRAV11-201ENST00000539512 E2F7Q96AV8 911 aa9.06□□□□□ -0.96
TRAV11-201ENST00000539512 SLC5A4Q9NY91 659 aa9.06□□□□□ -0.96
TRAV11-201ENST00000539512 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 CYP2C8P10632 490 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 POU3F3P20264 500 aaPredicted RBP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 LSP1P33241 339 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 ID4P47928 161 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 NCKAP1LP55160 1127 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 HERVK_113P62684 666 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 RGL3Q3MIN7 710 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 FSTL4Q6MZW2 842 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 TEPPQ6URK8 271 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 NECAB2Q7Z6G3 386 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 MZB1Q8WU39 189 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 ERCC4Q92889 916 aaPredicted RBP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 ELF4Q99607 663 aaPredicted RBP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 PDGFDQ9GZP0 370 aaPredicted RBP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 MCOLN1Q9GZU1 580 aa9.05□□□□□ -0.96
TRAV11-201ENST00000539512 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAV11-201ENST00000539512 C4BPAP04003 597 aaKnown RBP9.04□□□□□ -0.96
TRAV11-201ENST00000539512 CD40P25942 277 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 FNTBP49356 437 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 SESN3P58005 492 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 EVA1CP58658 441 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 KCNN1Q92952 543 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 GBP4Q96PP9 640 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 CNTD2Q9H8S5 307 aa9.04□□□□□ -0.96
TRAV11-201ENST00000539512 MBD1Q9UIS9 605 aaPredicted RBP9.04□□□□□ -0.96
TRAV11-201ENST00000539512 MMEP08473 750 aa9.03□□□□□ -0.96
TRAV11-201ENST00000539512 ENO2P09104 434 aaPredicted RBP9.03□□□□□ -0.96
TRAV11-201ENST00000539512 SDHAP31040 664 aa9.03□□□□□ -0.96
TRAV11-201ENST00000539512 ADCY1Q08828 1119 aa9.03□□□□□ -0.96
TRAV11-201ENST00000539512 SEC23AQ15436 765 aa9.03□□□□□ -0.96
TRAV11-201ENST00000539512 MCTP1Q6DN14 999 aa9.03□□□□□ -0.96
TRAV11-201ENST00000539512 PUS7LQ9H0K6 701 aaKnown RBP9.03□□□□□ -0.96
TRAV11-201ENST00000539512 TYW1Q9NV66 732 aaKnown RBP9.03□□□□□ -0.96
TRAV11-201ENST00000539512 NOC2LQ9Y3T9 749 aaKnown RBP9.03□□□□□ -0.96
TRAV11-201ENST00000539512 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
TRAV11-201ENST00000539512 MYOCOSA0A1B0GUC4 107 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.02□□□□□ -0.97
TRAV11-201ENST00000539512 ACOT7O00154 380 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 LRG1P02750 347 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 TMEM253P0C7T8 217 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 YBX3P16989 372 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRAV11-201ENST00000539512 CDR1P51861 262 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 DBPQ10586 325 aaPredicted RBP9.02□□□□□ -0.97
TRAV11-201ENST00000539512 CD276Q5ZPR3 534 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 CREB3L3Q68CJ9 461 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 C7orf31Q8N865 590 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 MTMR8Q96EF0 704 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 TMEM209Q96SK2 561 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 SGPP1Q9BX95 441 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 DDX56Q9NY93 547 aaKnown RBP9.02□□□□□ -0.97
TRAV11-201ENST00000539512 ASB1Q9Y576 335 aa9.02□□□□□ -0.97
TRAV11-201ENST00000539512 DVL2O14641 736 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 N4BP3O15049 544 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 MC3RP41968 323 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 ITKQ08881 620 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 BROXQ5VW32 411 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 LHFPL2Q6ZUX7 228 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 B3GNT8Q7Z7M8 397 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 FAM26EQ8N5C1 309 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 SMARCC2Q8TAQ2 1214 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 ASB15Q8WXK1 588 aa9.01□□□□□ -0.97
TRAV11-201ENST00000539512 C8BP07358 591 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 PTX3P26022 381 aaPredicted RBP9□□□□□ -0.97
TRAV11-201ENST00000539512 AOAHP28039 575 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 EPHA7Q15375 998 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 CATSPEREQ5SY80 951 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 GPR158Q5T848 1215 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 TIGD7Q6NT04 549 aaPredicted RBP9□□□□□ -0.97
TRAV11-201ENST00000539512 RPUSD2Q8IZ73 545 aaKnown RBP9□□□□□ -0.97
TRAV11-201ENST00000539512 CALML6Q8TD86 181 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 CLIC6Q96NY7 704 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 WRNIP1Q96S55 665 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 SLC38A3Q99624 504 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 KCNK12Q9HB15 430 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 KCNG1Q9UIX4 513 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 PCDHA5Q9Y5H7 936 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 IRAK3Q9Y616 596 aa9□□□□□ -0.97
TRAV11-201ENST00000539512 UBA6A0AVT1 1052 aaPredicted RBP8.99□□□□□ -0.97
TRAV11-201ENST00000539512 PRAMEF22A3QJZ6 481 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 PTGS1P23219 599 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 DLG4P78352 724 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 PHC1P78364 1004 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 SMAD3P84022 425 aaKnown RBP8.99□□□□□ -0.97
TRAV11-201ENST00000539512 LRRC32Q14392 662 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 TERF2Q15554 542 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 SMAD2Q15796 467 aaKnown RBP8.99□□□□□ -0.97
TRAV11-201ENST00000539512 CR1LQ2VPA4 569 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 PRAMEF18Q5VWM3 479 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 ZNF610Q8N9Z0 462 aa8.99□□□□□ -0.97
TRAV11-201ENST00000539512 COG1Q8WTW3 980 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms