RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TXLNAP40222 546 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 CPT1AP50416 773 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 UBE2HP62256 183 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 KARSQ15046 597 aaKnown RBP26.36■■□□□ 1.81
TMEM260-202ENST00000538838 FSCN1Q16658 493 aaKnown RBP26.36■■□□□ 1.81
TMEM260-202ENST00000538838 UTP14CQ5TAP6 766 aaKnown RBP26.36■■□□□ 1.81
TMEM260-202ENST00000538838 SWSAP1Q6NVH7 229 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 CATSPER3Q86XQ3 398 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 HSD17B14Q9BPX1 270 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 LXNQ9BS40 222 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 CCSER1Q9C0I3 900 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 RNF208Q9H0X6 261 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 WRAP73Q9P2S5 460 aaPredicted RBP26.36■■□□□ 1.81
TMEM260-202ENST00000538838 GABBR1Q9UBS5 961 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 IGSF9BQ9UPX0 1349 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 ARID2Q68CP9 1835 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 A0A087X0B3 334 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 IGKV6D-21A0A0A0MT36 114 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 HOXD8P13378 290 aaPredicted RBP26.36■■□□□ 1.81
TMEM260-202ENST00000538838 RPA1P27694 616 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 ECM1Q16610 540 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 NEK9Q8TD19 979 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 PLIN2Q99541 437 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 POLR3CQ9BUI4 534 aaPredicted RBP26.36■■□□□ 1.81
TMEM260-202ENST00000538838 SPC25Q9HBM1 224 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 FAM13BQ9NYF5 915 aa26.36■■□□□ 1.81
TMEM260-202ENST00000538838 EMSYQ7Z589 1322 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 SLITRK3O94933 977 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 LGALS2P05162 132 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 P4HBP07237 508 aaKnown RBP26.35■■□□□ 1.81
TMEM260-202ENST00000538838 ZNF286BP0CG31 522 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 DGKDQ16760 1214 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 POTEGQ6S5H5 508 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 RASSF8Q8NHQ8 419 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 PNMA5Q96PV4 448 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 TUFT1Q9NNX1 390 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 ZNF302Q9NR11 478 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 STK24Q9Y6E0 443 aa26.35■■□□□ 1.81
TMEM260-202ENST00000538838 BRCA2P51587 3418 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 LOXHD1Q8IVV2 1947 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 KDM3AQ9Y4C1 1321 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 LGR5O75473 907 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 MYCNP04198 464 aaPredicted RBP26.34■■□□□ 1.81
TMEM260-202ENST00000538838 NDUFA8P51970 172 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 GRB10Q13322 594 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 TPH2Q8IWU9 490 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 PDILTQ8N807 584 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 DEFB118Q96PH6 123 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 PANK2Q9BZ23 570 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 HPSEQ9Y251 543 aa26.34■■□□□ 1.81
TMEM260-202ENST00000538838 PPFIA4O75335 1185 aa26.33■■□□□ 1.81
TMEM260-202ENST00000538838 QARSP47897 775 aaKnown RBP26.33■■□□□ 1.81
TMEM260-202ENST00000538838 NKX3-2P78367 333 aa26.33■■□□□ 1.81
TMEM260-202ENST00000538838 BRDTQ58F21 947 aaPredicted RBP26.33■■□□□ 1.81
TMEM260-202ENST00000538838 GNASQ5JWF2 1037 aa26.33■■□□□ 1.81
TMEM260-202ENST00000538838 CALML4Q96GE6 196 aa26.33■■□□□ 1.81
TMEM260-202ENST00000538838 CDK5RAP3Q96JB5 506 aa26.33■■□□□ 1.81
TMEM260-202ENST00000538838 AZI2Q9H6S1 392 aa26.33■■□□□ 1.81
TMEM260-202ENST00000538838 DDX11L8A8MPP1 907 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 PLCG1P19174 1290 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 PSMC5P62195 406 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 TMEM119Q4V9L6 283 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 HYIQ5T013 277 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 FAM160B1Q5W0V3 765 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 AFAP1L1Q8TED9 768 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 GLG1Q92896 1179 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 ATP6V0A1Q93050 837 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 DDX19AQ9NUU7 478 aaKnown RBP26.32■■□□□ 1.8
TMEM260-202ENST00000538838 KCNH3Q9ULD8 1083 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 KIAA1024Q9UPX6 916 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 MAFBQ9Y5Q3 323 aaPredicted RBP26.32■■□□□ 1.8
TMEM260-202ENST00000538838 FAM237AA0A1B0GTK4 181 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 ZNF862O60290 1169 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 MYL3P08590 195 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 LIG1P18858 919 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 STAT5BP51692 787 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 PDXDC2PQ6P474 469 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 KLHDC9Q8NEP7 349 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 LRRC15Q8TF66 581 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 C16orf70Q9BSU1 422 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 ZSWIM4Q9H7M6 989 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 CCDC39Q9UFE4 941 aa26.32■■□□□ 1.8
TMEM260-202ENST00000538838 CST5P28325 142 aaPredicted RBP26.31■■□□□ 1.8
TMEM260-202ENST00000538838 PRKCEQ02156 737 aa26.31■■□□□ 1.8
TMEM260-202ENST00000538838 LRRC41Q15345 812 aa26.31■■□□□ 1.8
TMEM260-202ENST00000538838 CCDC73Q6ZRK6 1079 aa26.31■■□□□ 1.8
TMEM260-202ENST00000538838 KCNK18Q7Z418 384 aa26.31■■□□□ 1.8
TMEM260-202ENST00000538838 NT5C3AQ9H0P0 336 aa26.31■■□□□ 1.8
TMEM260-202ENST00000538838 A0A087WWV3 80 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 POLR2DO15514 142 aaKnown RBP26.3■■□□□ 1.8
TMEM260-202ENST00000538838 SLC26A4O43511 780 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 ATP4AP20648 1035 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 MARK3P27448 753 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 TRMT1LQ7Z2T5 733 aaKnown RBP26.3■■□□□ 1.8
TMEM260-202ENST00000538838 RNF180Q86T96 592 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 DHX58Q96C10 678 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 SMARCAD1Q9H4L7 1026 aa26.3■■□□□ 1.8
TMEM260-202ENST00000538838 SYKP43405 635 aa26.29■■□□□ 1.8
TMEM260-202ENST00000538838 PSMC6P62333 389 aa26.29■■□□□ 1.8
TMEM260-202ENST00000538838 RRAGBQ5VZM2 374 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms