RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CCDC175P0C221 793 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 ETF1P62495 437 aaKnown RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 ITGB3BPQ13352 177 aaPredicted RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 VGLL4Q14135 290 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 MTF1Q14872 753 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 CYP26C1Q6V0L0 522 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 C1orf186Q6ZWK4 172 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 MIER3Q7Z3K6 550 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 SULF1Q8IWU6 871 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 OR8K1Q8NGG5 319 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 DNAJC7Q99615 494 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 LXNQ9BS40 222 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 TTYH3Q9C0H2 523 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 MAF1Q9H063 256 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 OLFML3Q9NRN5 406 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 NKRFO15226 690 aaKnown RBP eCLIP16.39■□□□□ 0.21
ATL3-203ENST00000538786 CASP5P51878 434 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 BAATQ14032 418 aaPredicted RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 FIGNQ5HY92 759 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 ARHGEF16Q5VV41 709 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 ZC3H3Q8IXZ2 948 aaKnown RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 TEX13BQ9BXU2 312 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
ATL3-203ENST00000538786 PHIPQ8WWQ0 1821 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 SBF1O95248 1867 aa16.39■□□□□ 0.21
ATL3-203ENST00000538786 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
ATL3-203ENST00000538786 RSPH10B2B2RC85 870 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 DDX39AO00148 427 aaKnown RBP16.38■□□□□ 0.21
ATL3-203ENST00000538786 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 TRIM21P19474 475 aaKnown RBP16.38■□□□□ 0.21
ATL3-203ENST00000538786 BMT2Q1RMZ1 405 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 DESI2Q9BSY9 194 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 ADGRG1Q9Y653 693 aa16.38■□□□□ 0.21
ATL3-203ENST00000538786 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 ZBTB39O15060 712 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 P4HBP07237 508 aaKnown RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 MYCLP12524 364 aaPredicted RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 MARSP56192 900 aaKnown RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 ERVK-24P63145 666 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 SYT10Q6XYQ8 523 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 BANK1Q8NDB2 785 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 MRPL44Q9H9J2 332 aaKnown RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 PHLPP2Q6ZVD8 1323 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 ADM5C9JUS6 153 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 FAM13AO94988 1023 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.216e-7■■■■□ 24.6
ATL3-203ENST00000538786 CCND2P30279 289 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 CCDC40Q4G0X9 1142 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
ATL3-203ENST00000538786 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 SEL1LQ9UBV2 794 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 SIK3Q9Y2K2 1263 aa16.37■□□□□ 0.21
ATL3-203ENST00000538786 RLFQ13129 1914 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 PDXKO00764 312 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 MYBP10242 640 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 GUCY2CP25092 1073 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 KLK7P49862 253 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 ZNF131P52739 623 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 ZBED6P86452 979 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 ADAM9Q13443 819 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 DLK2Q6UY11 383 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 VSIG10LQ86VR7 867 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 PURBQ96QR8 312 aaKnown RBP16.36■□□□□ 0.21
ATL3-203ENST00000538786 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 PARVGQ9HBI0 331 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 CSADQ9Y600 493 aa16.36■□□□□ 0.21
ATL3-203ENST00000538786 ARHGEF35A5YM69 484 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 CETN3O15182 167 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 EIF3DO15371 548 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATL3-203ENST00000538786 LYPLA2O95372 231 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 HOXD13P35453 343 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 MYCT1Q8N699 235 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 NSUN6Q8TEA1 469 aaKnown RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 TESPA1A2RU30 521 aaPredicted RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 MAFGO15525 162 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 CTIFO43310 598 aaKnown RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 PRPF6O94906 941 aaKnown RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 GCNT3O95395 438 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 NR3C2P08235 984 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 IREB2P48200 963 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms