RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 GFPT1Q06210 699 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TMEM164Q5U3C3 297 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 AK8Q96MA6 479 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SPAG5Q96R06 1193 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 C7orf25Q9BPX7 421 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 MUC3BQ9H195 1237 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 hCG_1642624A0A1W2PR95 340 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 LIN7AO14910 233 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 PRKAB2O43741 272 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 PPP1R12BO60237 982 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SLC5A1P13866 664 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TMOD1P28289 359 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 PRPHP41219 470 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TROAPQ12815 778 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 IFI16Q16666 785 aaKnown RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 PFKFB3Q16875 520 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SPRED3Q2MJR0 410 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TDRD12Q587J7 1177 aaKnown RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 HOOK3Q86VS8 718 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 LCORLQ8N3X6 602 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 ANKRD13CQ8N6S4 541 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 NSMCE1Q8WV22 266 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 UBLCP1Q8WVY7 318 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 BAP1Q92560 729 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 AS3MTQ9HBK9 375 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SH3GLB2Q9NR46 395 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 NOP53Q9NZM5 478 aaKnown RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 NOVA2Q9UNW9 492 aaKnown RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SLC12A4Q9UP95 1085 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 MROH5Q6ZUA9 1318 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 ALS2Q96Q42 1657 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 FRMD3A2A2Y4 597 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 PRSS47A8MTI9 375 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 CCDC188H7C350 402 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 ERMARDQ5T6L9 678 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 CENPPQ6IPU0 288 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 KIF6Q6ZMV9 814 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 KLHL7Q8IXQ5 586 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 BLIDQ8IZY5 108 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 STAG2Q8N3U4 1231 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TBC1D31Q96DN5 1066 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 XPO6Q96QU8 1125 aaKnown RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 FAM129AQ9BZQ8 928 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TCP11L1Q9NUJ3 509 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 TRPM3Q9HCF6 1732 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-209ENST00000538654 BTNL10A8MVZ5 291 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 ATP2C2O75185 946 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 CD53P19397 219 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 RFC5P40937 340 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 MAGOHP61326 146 aaKnown RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 ASIC1P78348 528 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 RPS6KA1Q15418 735 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 UAP1Q16222 522 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 C10orf76Q5T2E6 689 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 SFMBT2Q5VUG0 894 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 ACTRT1Q8TDG2 376 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 ZNF483Q8TF39 744 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 MAGOHBQ96A72 148 aaKnown RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 SPDL1Q96EA4 605 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 SAAL1Q96ER3 474 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 TRIM9Q9C026 710 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 NSRP1Q9H0G5 558 aaKnown RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 MYH7BA7E2Y1 1941 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 MINDY4BA8MYZ0 360 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 OPLAHO14841 1288 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 LUC7L3O95232 432 aaKnown RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 FTCDO95954 541 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 TGFB3P10600 412 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 ECHS1P30084 290 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 COPB2P35606 906 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 CCNHP51946 323 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 CTSWP56202 376 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 LRRC63Q05C16 580 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 EHHADHQ08426 723 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 MYO1EQ12965 1108 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 KRT71Q3SY84 523 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 AP1ARQ63HQ0 302 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 FOXR2Q6PJQ5 311 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 CROCCP2Q86T23 111 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 SCFD2Q8WU76 684 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 LMBR1Q8WVP7 490 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 TCP11Q8WWU5 503 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 ANKRD27Q96NW4 1050 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNHG1-209ENST00000538654 SAMD15Q9P1V8 674 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 CEP72Q9P209 647 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 FBXL5Q9UKA1 691 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 DUOX1Q9NRD9 1551 aa9.85□□□□□ -0.83
SNHG1-209ENST00000538654 KLHL33A6NCF5 533 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 EPHB6O15197 1021 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 ANP32DO95626 131 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 MAP2K1Q02750 393 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms