RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ZNF34Q8IZ26 560 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 FAM133AQ8N9E0 248 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 PNMA1Q8ND90 353 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 CCDC88AQ3V6T2 1871 aa20.3■□□□□ 0.84
SFSWAP-207ENST00000538548 PPFIA2O75334 1257 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 CLTAP09496 248 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 NONOQ15233 471 aaKnown RBP eCLIP20.29■□□□□ 0.841e-6■■■□□ 17.7
SFSWAP-207ENST00000538548 C11orf91Q3C1V1 193 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 METTL13Q8N6R0 699 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 MMEP08473 750 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 CHRNDQ07001 517 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 PNMA8AQ86V59 439 aaPredicted RBP20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 DGKHQ86XP1 1220 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 RASGEF1CQ8N431 466 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 PROCA1Q8NCQ7 364 aaPredicted RBP20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 DCP1AQ9NPI6 582 aaPredicted RBP20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 UTP11Q9Y3A2 253 aaKnown RBP20.29■□□□□ 0.84
SFSWAP-207ENST00000538548 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 TOGARAM1Q9Y4F4 1720 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 ANP32DO95626 131 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 CHN1P15882 459 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 ZNF268Q14587 947 aaPredicted RBP20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 ZCWPW2Q504Y3 356 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 DZIP3Q86Y13 1208 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 GOLPH3Q9H4A6 298 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 MAD2L2Q9UI95 211 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 LAMB1P07942 1786 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 COL1A1P02452 1464 aaPredicted RBP20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 TTI1O43156 1089 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 NEK8Q86SG6 692 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 MYOCDQ8IZQ8 938 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 ZNF384Q8TF68 577 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 THOC1Q96FV9 657 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 TXLNGYQ9BZA5 131 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 ZMYND12Q9H0C1 365 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 LRRC4CQ9HCJ2 640 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 SAMD15Q9P1V8 674 aa20.28■□□□□ 0.84
SFSWAP-207ENST00000538548 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 TRAF5O00463 557 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 CAND2O75155 1236 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 MMP13P45452 471 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 ENOX2Q16206 610 aaKnown RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 SLC35G1Q2M3R5 365 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 ATXN2LQ8WWM7 1075 aaKnown RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 CYTH3O43739 400 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 ITGA4P13612 1032 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 CCNHP51946 323 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 ORC2Q13416 577 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 LRRC41Q15345 812 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 TRPM8Q7Z2W7 1104 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 TBC1D1Q86TI0 1168 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 CEP63Q96MT8 703 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 PNMA5Q96PV4 448 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 FMO2Q99518 471 aa20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 ARPP21Q9UBL0 812 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-207ENST00000538548 AFF2P51816 1311 aa20.27■□□□□ 0.83
SFSWAP-207ENST00000538548 GNA14O95837 355 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 NUDT17P0C025 328 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 ALADP13716 330 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 KCNQ4P56696 695 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 BZW1Q7L1Q6 419 aaKnown RBP20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 PGM2Q96G03 612 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 L3MBTL3Q96JM7 780 aaPredicted RBP20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 SPAG5Q96R06 1193 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 LRRC27Q9C0I9 530 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 ATP8A2Q9NTI2 1148 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 NOP53Q9NZM5 478 aaKnown RBP20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 ZBTB1Q9Y2K1 713 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 ATP8A1Q9Y2Q0 1164 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 SLIT2O94813 1529 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 GYG1P46976 350 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 PTK2Q05397 1052 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 TRIM59Q8IWR1 403 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 GLIS3Q8NEA6 775 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 ARMC2Q8NEN0 867 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 CRNKL1Q9BZJ0 848 aaKnown RBP20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 KCNMB3Q9NPA1 279 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 TRPC6Q9Y210 931 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 L3MBTL1Q9Y468 752 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
SFSWAP-207ENST00000538548 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 MARSP56192 900 aaKnown RBP20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 FAM98CQ17RN3 349 aaKnown RBP20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 SBK1Q52WX2 424 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 PEX26Q7Z412 305 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 TPCN2Q8NHX9 752 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 RAD54LQ92698 747 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 GANQ9H2C0 597 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 DPH5Q9H2P9 285 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 SKAP2O75563 359 aaPredicted RBP20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 CYP2D6P10635 497 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 GCKP35557 465 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms