RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 GHRHRQ02643 423 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 SPOUT1Q5T280 376 aaKnown RBP12.92□□□□□ -0.34
CLPB-208ENST00000538021 C20orf194Q5TEA3 1177 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 TSHZ1Q6ZSZ6 1077 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 NPAS4Q8IUM7 802 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 ADSSL1Q8N142 457 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 KREMEN2Q8NCW0 462 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 DNAJB3Q8WWF6 145 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 LINC01599Q8WXQ3 324 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 RTEL1Q9NZ71 1219 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
CLPB-208ENST00000538021 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 PPP1R11O60927 126 aaPredicted RBP12.91□□□□□ -0.34
CLPB-208ENST00000538021 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 SRGAP2BP0DMP2 458 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 TECP42680 631 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 GATMP50440 423 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 DUSP6Q16828 381 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 RTN4RL1Q86UN2 441 aaPredicted RBP12.91□□□□□ -0.34
CLPB-208ENST00000538021 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 AGO3Q9H9G7 860 aaKnown RBP12.91□□□□□ -0.34
CLPB-208ENST00000538021 LRFN2Q9ULH4 789 aa12.91□□□□□ -0.34
CLPB-208ENST00000538021 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 ZNF213O14771 459 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 MARK3P27448 753 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 MTMR3Q13615 1198 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 LLGL2Q6P1M3 1020 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 ZNF589Q86UQ0 364 aaPredicted RBP12.9□□□□□ -0.34
CLPB-208ENST00000538021 HOMER1Q86YM7 354 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 SAMD3Q8N6K7 520 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 ZSCAN10Q96SZ4 725 aaPredicted RBP12.9□□□□□ -0.34
CLPB-208ENST00000538021 CDCA3Q99618 268 aaPredicted RBP12.9□□□□□ -0.34
CLPB-208ENST00000538021 FTHL17Q9BXU8 183 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 FAM49AQ9H0Q0 323 aaPredicted RBP12.9□□□□□ -0.34
CLPB-208ENST00000538021 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 DOCK5Q9H7D0 1870 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
CLPB-208ENST00000538021 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 ZBTB5O15062 677 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 FIBPO43427 364 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 BRD1O95696 1058 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 SCG2P13521 617 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 ERVFC1P60507 584 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 IGBP1P78318 339 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 MRPS6P82932 125 aaKnown RBP12.89□□□□□ -0.35
CLPB-208ENST00000538021 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
CLPB-208ENST00000538021 UBE3AQ05086 875 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 GRIK4Q16099 956 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 ANKRD54Q6NXT1 300 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 CRIPAKQ8N1N5 446 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
CLPB-208ENST00000538021 S1PR5Q9H228 398 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 MFSD1Q9H3U5 465 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 AAASQ9NRG9 546 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 NR2E1Q9Y466 385 aa12.89□□□□□ -0.35
CLPB-208ENST00000538021 B4E1Z4 1266 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 STAM2O75886 525 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 FGF18O76093 207 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 TCF7P36402 384 aaPredicted RBP12.88□□□□□ -0.35
CLPB-208ENST00000538021 PAK2Q13177 524 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
CLPB-208ENST00000538021 IER5Q5VY09 327 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
CLPB-208ENST00000538021 SYCE2Q6PIF2 218 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 THNSL1Q8IYQ7 743 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 ZBTB10Q96DT7 871 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
CLPB-208ENST00000538021 SMOC2Q9H3U7 446 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 TMEM260Q9NX78 707 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 PADI3Q9ULW8 664 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
CLPB-208ENST00000538021 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 M0QZ92 97 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 GLG1Q92896 1179 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 ERAP1Q9NZ08 941 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
CLPB-208ENST00000538021 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 TRPV2Q9Y5S1 764 aa12.87□□□□□ -0.35
CLPB-208ENST00000538021 MYO10Q9HD67 2058 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms