RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 EXOC8Q8IYI6 725 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 FAM13CQ8NE31 585 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 ZMAT2Q96NC0 199 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TUBGCP5Q96RT8 1024 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TAOK3Q9H2K8 898 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 BHMT2Q9H2M3 363 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 DPH5Q9H2P9 285 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SEC31BQ9NQW1 1179 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 HSFX1Q9UBD0 423 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TRIM33Q9UPN9 1127 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 PA2G4Q9UQ80 394 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 USP20Q9Y2K6 914 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SRPRBQ9Y5M8 271 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 LSM1O15116 133 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 PORP16435 677 aaPredicted RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 SERPINB3P29508 390 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 CDK7P50613 346 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 RILPL1Q5EBL4 403 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 KLHDC7AQ5VTJ3 777 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 TMEM53Q6P2H8 277 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 TMC3Q7Z5M5 1100 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 SMYD4Q8IYR2 804 aaPredicted RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 ST13P4Q8IZP2 240 aaPredicted RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 UTP4Q969X6 686 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 COG3Q96JB2 828 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 NLRP3Q96P20 1036 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 EXOC1Q9NV70 894 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 BTBD7Q9P203 1132 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 MAGEC2Q9UBF1 373 aaPredicted RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 MYH7BA7E2Y1 1941 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF609O15014 1411 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 RGS16O15492 202 aaPredicted RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 PJA2O43164 708 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 ATP9BO43861 1147 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 AGTP01019 485 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 AFPP02771 609 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 LYNP07948 512 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 MAGEA1P43355 309 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 SERPINB8P50452 374 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 DPYDQ12882 1025 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 DAB2IPQ5VWQ8 1189 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 RNF43Q68DV7 783 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 INTS8Q75QN2 995 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 MARK2Q7KZI7 788 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 DZIP1Q86YF9 867 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 KLHL7Q8IXQ5 586 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 USP38Q8NB14 1042 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 NAT14Q8WUY8 206 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 NELFBQ8WX92 580 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 PAGE5Q96GU1 130 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 EFR3BQ9Y2G0 817 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 PCDH11XQ9BZA7 1347 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 LAMA4Q16363 1823 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 SMIM31A0A1B0GVY4 71 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 MAP3K7O43318 606 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 AKR1B10O60218 316 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 LCA5LO95447 670 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 PABPC4LP0CB38 370 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 VAV1P15498 845 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 VARSP26640 1264 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 RGS2P41220 211 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 IFNAR2P48551 515 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 MKRN3Q13064 507 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 C6orf118Q5T5N4 469 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 SH3RF1Q7Z6J0 888 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 VSIG1Q86XK7 387 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF507Q8TCN5 953 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 SNRNP27Q8WVK2 155 aaKnown RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 BHMTQ93088 406 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 AGPAT5Q9NUQ2 364 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 C9orf78Q9NZ63 289 aaPredicted RBP9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 LNPEPQ9UIQ6 1025 aa9.24□□□□□ -0.93
SRGAP1-202ENST00000537556 PDS5AQ29RF7 1337 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 PASKQ96RG2 1323 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 CLTCQ00610 1675 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 A0A1W2PQJ5 194 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 TMEM110-MUSTN1A8MSY1 372 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF263O14978 683 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ASMTLO95671 621 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 XBP1P17861 261 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 RASA1P20936 1047 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 CA8P35219 290 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ITGA9Q13797 1035 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 INAQ16352 499 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 FIGNQ5HY92 759 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 MEX3CQ5U5Q3 659 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 SYDE2Q5VT97 1194 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF280DQ6N043 979 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 DUS1LQ6P1R4 473 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 KRT26Q7Z3Y9 468 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 SAPCD2Q86UD0 394 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 NOSTRINQ8IVI9 506 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 STAG2Q8N3U4 1231 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 SUPT20HQ8NEM7 779 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms