RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 GNAT2P19087 354 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 HNRNPH3P31942 346 aaKnown RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TNIP1Q15025 636 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ZMYM1Q5SVZ6 1142 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 FAM196AQ6ZSG2 479 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TAB3Q8N5C8 712 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 MB21D1Q8N884 522 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 EZH1Q92800 747 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 PGM2Q96G03 612 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ISCUQ9H1K1 167 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 INTS13Q9NVM9 706 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 PAIP2BQ9ULR5 123 aaKnown RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 USTQ9Y2C2 406 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 MRC1P22897 1456 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 CCDC166P0CW27 439 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 LIFRP42702 1097 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 KIF11P52732 1056 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ITGB3BPQ13352 177 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ARHGAP44Q17R89 818 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TCP11X2Q5H9J9 407 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 UNC13DQ70J99 1090 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 OPTNQ96CV9 577 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 Q9H521 79 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 MLXIPLQ9NP71 852 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 GPHNQ9NQX3 736 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 SLC12A4Q9UP95 1085 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 RASGRF2O14827 1237 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 FANCGO15287 622 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 STARD3NLO95772 234 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 PARP6Q2NL67 630 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 SNX29Q8TEQ0 813 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 SYN2Q92777 582 aaPredicted RBP5.84□□□□□ -1.48
PTPRD-213ENST00000537002 ORAI2Q96SN7 254 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 NUF2Q9BZD4 464 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 MST1RQ04912 1400 aa5.84□□□□□ -1.48
PTPRD-213ENST00000537002 ORC4O43929 436 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CHGBP05060 677 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 KRT5P13647 590 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CDC25AP30304 524 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC14Q15048 493 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CHRNA2Q15822 529 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 FAM47EQ6ZV65 393 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 BRINP3Q76B58 766 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC125Q86Z20 511 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 NME8Q8N427 588 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CCT6BQ92526 530 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 TECPR2O15040 1411 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 BIRC5O15392 142 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 PJA2O43164 708 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 AGTP01019 485 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 MYBL1P10243 752 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 RPL13P26373 211 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 PPARAQ07869 468 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC15Q0P6D6 951 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 PTPAQ15257 358 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 C6orf118Q5T5N4 469 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 KIFAP3Q92845 792 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 RNPC3Q96LT9 517 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 GORASP1Q9BQQ3 440 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ZMYND12Q9H0C1 365 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 SENP2Q9HC62 589 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 AIPL1Q9NZN9 384 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF711Q9Y462 761 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 NDC80O14777 642 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 GAS8O95995 478 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 IL2RBP14784 551 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 TRPM8Q7Z2W7 1104 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 DZIP3Q86Y13 1208 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 TTC16Q8NEE8 873 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 BHMT2Q9H2M3 363 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 SSX2IPQ9Y2D8 614 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 COMMD3-BMI1R4GMX3 469 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ARHGAP23Q9P227 1491 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CPDO75976 1380 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 M0R2C6 588 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CALUO43852 315 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 AP1G2O75843 785 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CPA3P15088 417 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 GNAQP50148 359 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 TMEM154Q6P9G4 183 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 KRT27Q7Z3Y8 459 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 PAF1Q8N7H5 531 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 STKLD1Q8NE28 680 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 OR2W6PQ8NHA6 318 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 MAIP1Q8WWC4 291 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 EPSTI1Q96J88 318 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ZIM3Q96PE6 472 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 SMARCAL1Q9NZC9 954 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 PCDHB6Q9Y5E3 794 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 DIP2CQ9Y2E4 1556 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CTCFP49711 727 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 IRX4P78413 519 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CRACR2BQ8N4Y2 399 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 MMTAG2Q9BU76 263 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 RHBDL2Q9NX52 303 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 TRIM10Q9UDY6 481 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ANGPTL2Q9UKU9 493 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 MON2Q7Z3U7 1717 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 POC1B-GALNT4F8VUJ3 575 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms