RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ZNF200P98182 395 aaPredicted RBP12.35□□□□□ -0.43
CCDC60-202ENST00000535685 MTMR1Q13613 665 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 MBTPS1Q14703 1052 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 UBE2SQ16763 222 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
CCDC60-202ENST00000535685 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 MCTP2Q6DN12 878 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 Q6ZUG5 572 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 HERC6Q8IVU3 1022 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
CCDC60-202ENST00000535685 GAS2L1Q99501 681 aaPredicted RBP12.35□□□□□ -0.43
CCDC60-202ENST00000535685 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 EVPLQ92817 2033 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 NFASCO94856 1347 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 NRCAMQ92823 1304 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 TTC3P53804 2025 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 GSTTP1A0A1W2PQM5 241 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 KIF28PB7ZC32 967 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 MEIS1O00470 390 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
CCDC60-202ENST00000535685 LGR5O75473 907 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
CCDC60-202ENST00000535685 SREBF1P36956 1147 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 METAP2P50579 478 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC60-202ENST00000535685 ADCY7P51828 1080 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 RABGGTBP53611 331 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 WDR5P61964 334 aaKnown RBP12.34□□□□□ -0.43
CCDC60-202ENST00000535685 FAM26DQ5JW98 314 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 NIPA1Q7RTP0 329 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 BRF1Q92994 677 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 ZMYND12Q9H0C1 365 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 KDM4CQ9H3R0 1056 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 PRDM12Q9H4Q4 367 aa12.34□□□□□ -0.43
CCDC60-202ENST00000535685 MBLAC1A4D2B0 266 aaPredicted RBP12.33□□□□□ -0.44
CCDC60-202ENST00000535685 RSPH10B2B2RC85 870 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 DLL1O00548 723 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 TREHO43280 583 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 CYP3A4P08684 503 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 RSPH10BP0C881 870 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 SCG2P13521 617 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 MYOGP15173 224 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
CCDC60-202ENST00000535685 KCNJ6P48051 423 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 FGD1P98174 961 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 IKBKEQ14164 716 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 ADGRE1Q14246 886 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 NTRK3Q16288 839 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 PKN1Q16512 942 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 CEP55Q53EZ4 464 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 PLEKHG4Q58EX7 1191 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 CCDC12Q8WUD4 166 aaPredicted RBP12.33□□□□□ -0.44
CCDC60-202ENST00000535685 SMARCAD1Q9H4L7 1026 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
CCDC60-202ENST00000535685 TELO2Q9Y4R8 837 aa12.33□□□□□ -0.44
CCDC60-202ENST00000535685 SIP14410 1827 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 ATG7O95352 703 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
CCDC60-202ENST00000535685 NEFLP07196 543 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 CPA1P15085 419 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 IFNAR1P17181 557 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 THPOP40225 353 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 TAF2Q6P1X5 1199 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 TRIM50Q86XT4 487 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 FAM177A1Q8N128 213 aaPredicted RBP12.32□□□□□ -0.44
CCDC60-202ENST00000535685 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 RNF26Q9BY78 433 aaPredicted RBP12.32□□□□□ -0.44
CCDC60-202ENST00000535685 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
CCDC60-202ENST00000535685 SETD4Q9NVD3 440 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 SLC9A2Q9UBY0 812 aa12.32□□□□□ -0.44
CCDC60-202ENST00000535685 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
CCDC60-202ENST00000535685 GJB5O95377 273 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 CA3P07451 260 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 GNA11P29992 359 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 TAP1Q03518 808 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 TCTN1Q2MV58 587 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
CCDC60-202ENST00000535685 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-202ENST00000535685 PLPPR4Q7Z2D5 763 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 DBF4BQ8NFT6 615 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-202ENST00000535685 TNPO1Q92973 898 aaKnown RBP12.31□□□□□ -0.44
CCDC60-202ENST00000535685 PCYT2Q99447 389 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 RAD9AQ99638 391 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 AGO4Q9HCK5 861 aaKnown RBP12.31□□□□□ -0.44
CCDC60-202ENST00000535685 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 SH3GLB2Q9NR46 395 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms