RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 FANCBQ8NB91 859 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 MTUS1Q9ULD2 1270 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 TELO2Q9Y4R8 837 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 RBM8AQ9Y5S9 174 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 ZDBF2Q9HCK1 2354 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 NLRC5Q86WI3 1866 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 FOSP01100 380 aaPredicted RBP12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 KCNA5P22460 613 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 ARHGAP4P98171 946 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 ZP2Q05996 745 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 FUT2Q10981 343 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 MTMR1Q13613 665 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 GRIK4Q16099 956 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 NIPA1Q7RTP0 329 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 FIBCD1Q8N539 461 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 CRYGNQ8WXF5 182 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 PCYT2Q99447 389 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 GLT8D2Q9H1C3 349 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 IGSF9BQ9UPX0 1349 aa12.87□□□□□ -0.35
CLSTN3-206ENST00000535668 MEIS1O00470 390 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 PRC1O43663 620 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 EYA4O95677 639 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 MMP1P03956 469 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 CAMK1Q14012 370 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 IER5Q5VY09 327 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 FAM117BQ6P1L5 589 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 ADHFE1Q8IWW8 467 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 CMTR2Q8IYT2 770 aaKnown RBP12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 KCNH7Q9NS40 1196 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 RAPGEFL1Q9UHV5 662 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
CLSTN3-206ENST00000535668 SMIM35A0A1B0GVV1 85 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 SPDYE3A6NKU9 549 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 CTSHP09668 335 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 IL9P15248 144 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 MRPS6P82932 125 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 CEP55Q53EZ4 464 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 RTN4RL1Q86UN2 441 aaPredicted RBP12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 RIC8AQ9NPQ8 531 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
CLSTN3-206ENST00000535668 TECTAO75443 2155 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 SLC27A2O14975 620 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 INSRRP14616 1297 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 AP3B2Q13367 1082 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 ADAM15Q13444 863 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 COL9A3Q14050 684 aaPredicted RBP12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 NPAS4Q8IUM7 802 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 LINC01599Q8WXQ3 324 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 RBM28Q9NW13 759 aaKnown RBP12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 SLC9A2Q9UBY0 812 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 C5orf42Q9H799 3197 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
CLSTN3-206ENST00000535668 COL1A2P08123 1366 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 FSD2A1L4K1 749 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 GRM6O15303 877 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 DCXO43602 365 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 SORBS3O60504 671 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 CYP3A4P08684 503 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 GHRP10912 638 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 SREBF1P36956 1147 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 UBE3AQ05086 875 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 HYAL1Q12794 435 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 COASYQ13057 564 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 CBX2Q14781 532 aaPredicted RBP12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 UTP14CQ5TAP6 766 aaKnown RBP12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 CREB3L3Q68CJ9 461 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 MCTP2Q6DN12 878 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 BMP8AQ7Z5Y6 402 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 DNAJB3Q8WWF6 145 aa12.83□□□□□ -0.36
CLSTN3-206ENST00000535668 GLG1Q92896 1179 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 443.4 ms