RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 C4orf32Q8N8J7 132 aa23.15■■□□□ 1.3
CHFR-209ENST00000535181 TNPO1Q92973 898 aaKnown RBP23.15■■□□□ 1.3
CHFR-209ENST00000535181 ZSCAN16Q9H4T2 348 aaPredicted RBP23.15■■□□□ 1.3
CHFR-209ENST00000535181 PCDHA12Q9UN75 941 aa23.15■■□□□ 1.3
CHFR-209ENST00000535181 SAMM50Q9Y512 469 aa23.15■■□□□ 1.3
CHFR-209ENST00000535181 PCDHB6Q9Y5E3 794 aa23.15■■□□□ 1.3
CHFR-209ENST00000535181 CHMP2AO43633 222 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 SMIM10L2AP0DMW4 78 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 SMIM10L2BP0DMW5 78 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 NBR1Q14596 966 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 SWSAP1Q6NVH7 229 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 FERMT3Q86UX7 667 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 RNPEPQ9H4A4 650 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 TTC12Q9H892 705 aaPredicted RBP23.14■■□□□ 1.29
CHFR-209ENST00000535181 TBX21Q9UL17 535 aa23.14■■□□□ 1.29
CHFR-209ENST00000535181 MYH9P35579 1960 aaKnown RBP23.14■■□□□ 1.29
CHFR-209ENST00000535181 NRCAMQ92823 1304 aa23.13■■□□□ 1.29
CHFR-209ENST00000535181 KIAA0355O15063 1070 aa23.13■■□□□ 1.29
CHFR-209ENST00000535181 CHMP4BP1P59074 171 aa23.13■■□□□ 1.29
CHFR-209ENST00000535181 GDF6Q6KF10 455 aaPredicted RBP23.13■■□□□ 1.29
CHFR-209ENST00000535181 PDXDC2PQ6P474 469 aa23.13■■□□□ 1.29
CHFR-209ENST00000535181 TRPV6Q9H1D0 765 aa23.13■■□□□ 1.29
CHFR-209ENST00000535181 TRMT13Q9NUP7 481 aaKnown RBP23.13■■□□□ 1.29
CHFR-209ENST00000535181 C17orf102A2RUQ5 167 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 EML1O00423 815 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 GNAT1P11488 350 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 PRPHP41219 470 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 TXKP42681 527 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 PTGDRQ13258 359 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 PLCB4Q15147 1175 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 EPHA7Q15375 998 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 ATP8B4Q8TF62 1192 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 CTAGE1Q96RT6 745 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 GABBR1Q9UBS5 961 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 PRKAG2Q9UGJ0 569 aa23.12■■□□□ 1.29
CHFR-209ENST00000535181 BMP15O95972 392 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 MARK3P27448 753 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 ADAM17P78536 824 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 ATP2C1P98194 919 aaPredicted RBP23.11■■□□□ 1.29
CHFR-209ENST00000535181 PTGISQ16647 500 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 SPRYD3Q8NCJ5 442 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 PPP1R13LQ8WUF5 828 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 ATP6V0A1Q93050 837 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 FAM167AQ96KS9 214 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 TMEM39AQ9NV64 488 aa23.11■■□□□ 1.29
CHFR-209ENST00000535181 LTBP2Q14767 1821 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 POTEB3A0JP26 581 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 TRIM43BA6NCK2 446 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 HBP1O60381 514 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 ATP4AP20648 1035 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 FXR2P51116 673 aaKnown RBP eCLIP23.1■■□□□ 1.29
CHFR-209ENST00000535181 PPFIA1Q13136 1202 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 HIC1Q14526 733 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 POTEBQ6S5H4 581 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 NEK9Q8TD19 979 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 LMBR1Q8WVP7 490 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 BBXQ8WY36 941 aaPredicted RBP23.1■■□□□ 1.29
CHFR-209ENST00000535181 TRIM43Q96BQ3 446 aaPredicted RBP23.1■■□□□ 1.29
CHFR-209ENST00000535181 COL1A2P08123 1366 aa23.1■■□□□ 1.29
CHFR-209ENST00000535181 KAT6AQ92794 2004 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 RRN3P2A6NIE6 340 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 ZNF862O60290 1169 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 DKC1O60832 514 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHFR-209ENST00000535181 P4HBP07237 508 aaKnown RBP23.09■■□□□ 1.29
CHFR-209ENST00000535181 ZSCAN22P10073 491 aaPredicted RBP23.09■■□□□ 1.29
CHFR-209ENST00000535181 PSMC5P62195 406 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 RBL2Q08999 1139 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 PTK7Q13308 1070 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 GRIK4Q16099 956 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 TMEM266Q2M3C6 531 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 ARL6IP4Q66PJ3 421 aaKnown RBP23.09■■□□□ 1.29
CHFR-209ENST00000535181 NCAPH2Q6IBW4 605 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 SH3RF1Q7Z6J0 888 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 PRDM5Q9NQX1 630 aaPredicted RBP23.09■■□□□ 1.29
CHFR-209ENST00000535181 SETD4Q9NVD3 440 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 TRPC6Q9Y210 931 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 NOD1Q9Y239 953 aa23.09■■□□□ 1.29
CHFR-209ENST00000535181 MBLAC1A4D2B0 266 aaPredicted RBP23.08■■□□□ 1.29
CHFR-209ENST00000535181 INSRRP14616 1297 aa23.08■■□□□ 1.29
CHFR-209ENST00000535181 QARSP47897 775 aaKnown RBP23.08■■□□□ 1.29
CHFR-209ENST00000535181 UGCGQ16739 394 aa23.08■■□□□ 1.29
CHFR-209ENST00000535181 SERINC5Q86VE9 423 aa23.08■■□□□ 1.29
CHFR-209ENST00000535181 CAGE1Q8TC20 777 aa23.08■■□□□ 1.29
CHFR-209ENST00000535181 ZMYND8Q9ULU4 1186 aaPredicted RBP23.08■■□□□ 1.29
CHFR-209ENST00000535181 CEP131Q9UPN4 1083 aa23.08■■□□□ 1.29
CHFR-209ENST00000535181 MYH15Q9Y2K3 1946 aa23.08■■□□□ 1.28
CHFR-209ENST00000535181 TRIP12Q14669 1992 aaPredicted RBP23.07■■□□□ 1.28
CHFR-209ENST00000535181 H0YGN5 161 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 PITPNM1O00562 1244 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 TIMP1P01033 207 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 OATP04181 439 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 PRKCEQ02156 737 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 PDIA5Q14554 519 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 ZNF484Q5JVG2 852 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 CKAP2LQ8IYA6 745 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 CCDC155Q8N6L0 562 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 HSD17B14Q9BPX1 270 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 NOC4LQ9BVI4 516 aaKnown RBP23.07■■□□□ 1.28
CHFR-209ENST00000535181 RAB34Q9BZG1 259 aa23.07■■□□□ 1.28
CHFR-209ENST00000535181 MORC2Q9Y6X9 1032 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms