RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
VAMP1-204ENST00000535180 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
VAMP1-204ENST00000535180 COL20A1Q9P218 1284 aa12.56□□□□□ -0.4
VAMP1-204ENST00000535180 DUSP12Q9UNI6 340 aa12.56□□□□□ -0.4
VAMP1-204ENST00000535180 C2orf16Q68DN1 1984 aa12.56□□□□□ -0.4
VAMP1-204ENST00000535180 STK25O00506 426 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
VAMP1-204ENST00000535180 GGPS1O95749 300 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 LGALS2P05162 132 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
VAMP1-204ENST00000535180 NOVP48745 357 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 MGAT3Q09327 533 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 TBC1D8BQ0IIM8 1120 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 PLPP4Q5VZY2 271 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 KCNV1Q6PIU1 500 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-204ENST00000535180 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-204ENST00000535180 PATJQ8NI35 1801 aa12.55□□□□□ -0.4
VAMP1-204ENST00000535180 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 HIDE1A8MVS5 230 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 SORBS3O60504 671 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 EOMESO95936 686 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 APPP05067 770 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 NR3C2P08235 984 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 GNAT2P19087 354 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 GATMP50440 423 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 USH1GQ495M9 461 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 PPM1JQ5JR12 505 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 FBXO47Q5MNV8 452 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 TSHZ1Q6ZSZ6 1077 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 C1orf210Q8IVY1 113 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 THNSL1Q8IYQ7 743 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 LMBR1Q8WVP7 490 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 OSBP2Q969R2 916 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 FTHL17Q9BXU8 183 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 WNT16Q9UBV4 365 aa12.54□□□□□ -0.4
VAMP1-204ENST00000535180 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
VAMP1-204ENST00000535180 FRYQ5TBA9 3013 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
VAMP1-204ENST00000535180 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 EIF2AK2P19525 551 aaKnown RBP12.53□□□□□ -0.4
VAMP1-204ENST00000535180 ARHGAP4P98171 946 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 SP2Q02086 613 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 ATAT1Q5SQI0 421 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
VAMP1-204ENST00000535180 KIAA1841Q6NSI8 718 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 AGO3Q9H9G7 860 aaKnown RBP12.53□□□□□ -0.4
VAMP1-204ENST00000535180 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 NGRNQ9NPE2 291 aaKnown RBP12.53□□□□□ -0.4
VAMP1-204ENST00000535180 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
VAMP1-204ENST00000535180 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 ZZEF1O43149 2961 aa12.53□□□□□ -0.4
VAMP1-204ENST00000535180 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.4
VAMP1-204ENST00000535180 KRBA1A5PL33 1030 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 GPAA1O43292 621 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 TGFB3P10600 412 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 SCG2P13521 617 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 UBA1P22314 1058 aaKnown RBP12.52□□□□□ -0.41
VAMP1-204ENST00000535180 RFX1P22670 979 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 PLCB3Q01970 1234 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 PPARAQ07869 468 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 MRPS27Q92552 414 aaKnown RBP12.52□□□□□ -0.41
VAMP1-204ENST00000535180 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
VAMP1-204ENST00000535180 ACSF2Q96CM8 615 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-204ENST00000535180 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 KCNK12Q9HB15 430 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 ENTPD7Q9NQZ7 604 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 PXMP2Q9NR77 195 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 DLGAP2Q9P1A6 1054 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 PUF60Q9UHX1 559 aaKnown RBP12.52□□□□□ -0.41
VAMP1-204ENST00000535180 LRFN2Q9ULH4 789 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.41
VAMP1-204ENST00000535180 SPTLC1O15269 473 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 TGM1P22735 817 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 CD52P31358 61 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 XRRA1Q6P2D8 792 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 MCF2L2Q86YR7 1114 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 APPBP2Q92624 585 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 ANGPTL2Q9UKU9 493 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
VAMP1-204ENST00000535180 SQORQ9Y6N5 450 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 ABCB11O95342 1321 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 NRCAMQ92823 1304 aa12.51□□□□□ -0.41
VAMP1-204ENST00000535180 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
VAMP1-204ENST00000535180 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 DCNP07585 359 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms