RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 FAM178BQ8IXR5 827 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 FIBCD1Q8N539 461 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 NEK9Q8TD19 979 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 GLG1Q92896 1179 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 KHSRPQ92945 711 aaKnown RBP eCLIP14.36□□□□□ -0.11
USF1-211ENST00000534633 FAM122AQ96E09 287 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 IL17RAQ96F46 866 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 TCEANC2Q96MN5 208 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 CD320Q9NPF0 282 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 JADE2Q9NQC1 790 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 RWDD3Q9Y3V2 267 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 ARIH1Q9Y4X5 557 aaPredicted RBP14.36□□□□□ -0.11
USF1-211ENST00000534633 MYH9P35579 1960 aaKnown RBP14.35□□□□□ -0.11
USF1-211ENST00000534633 GRXCR2A6NFK2 248 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 C5orf67F2Z3F1 127 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 GPR37L1O60883 481 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 RB1P06400 928 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 MARK3P27448 753 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 LPIN1Q14693 890 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 COL19A1Q14993 1142 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 MARCH8Q5T0T0 291 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 PTCRAQ6ISU1 281 aaPredicted RBP14.35□□□□□ -0.11
USF1-211ENST00000534633 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 DHX32Q7L7V1 743 aaKnown RBP14.35□□□□□ -0.11
USF1-211ENST00000534633 SGMS1Q86VZ5 419 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 TEX2Q8IWB9 1127 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 PABPC5Q96DU9 382 aaKnown RBP14.35□□□□□ -0.11
USF1-211ENST00000534633 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
USF1-211ENST00000534633 PCDHA6Q9UN73 950 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 PCDHA8Q9Y5H6 950 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 EVPLQ92817 2033 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
USF1-211ENST00000534633 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 RRN3P2A6NIE6 340 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 IL9P15248 144 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 CTNNB1P35222 781 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 KRT32Q14532 448 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 FBXO47Q5MNV8 452 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 TSHZ1Q6ZSZ6 1077 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 GJD3Q8N144 294 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 CCDC82Q8N4S0 544 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
USF1-211ENST00000534633 JAKMIP1Q96N16 626 aaKnown RBP14.34□□□□□ -0.11
USF1-211ENST00000534633 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
USF1-211ENST00000534633 LMAN2LQ9H0V9 348 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 RC3H2Q9HBD1 1191 aaKnown RBP14.34□□□□□ -0.11
USF1-211ENST00000534633 JPH1Q9HDC5 661 aaPredicted RBP14.34□□□□□ -0.11
USF1-211ENST00000534633 PKD2L1Q9P0L9 805 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 SQORQ9Y6N5 450 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 WDR81Q562E7 1941 aa14.34□□□□□ -0.11
USF1-211ENST00000534633 ENPP3O14638 875 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 NCK2O43639 380 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 LINC00271P0C7V0 271 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 BMPR1AP36894 532 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 MRPS6P82932 125 aaKnown RBP14.33□□□□□ -0.12
USF1-211ENST00000534633 SYNE3Q6ZMZ3 975 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 CLP1Q92989 425 aaKnown RBP14.33□□□□□ -0.12
USF1-211ENST00000534633 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
USF1-211ENST00000534633 MXRA8Q9BRK3 442 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 KCNH7Q9NS40 1196 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 SLC9A2Q9UBY0 812 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 FAM50BQ9Y247 325 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 NFASCO94856 1347 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 CNTNAP5Q8WYK1 1306 aa14.33□□□□□ -0.12
USF1-211ENST00000534633 H3BQ06 376 aaPredicted RBP14.32□□□□□ -0.12
USF1-211ENST00000534633 INSRRP14616 1297 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 RPS6KB1P23443 525 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 SSTR3P32745 418 aaPredicted RBP14.32□□□□□ -0.12
USF1-211ENST00000534633 IGBP1P78318 339 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 IER5Q5VY09 327 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 PCYT2Q99447 389 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 FTHL17Q9BXU8 183 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 AZI2Q9H6S1 392 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 RIC8AQ9NPQ8 531 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 RBM28Q9NW13 759 aaKnown RBP14.32□□□□□ -0.12
USF1-211ENST00000534633 BRPF3Q9ULD4 1205 aa14.32□□□□□ -0.12
USF1-211ENST00000534633 FNDC1Q4ZHG4 1894 aaPredicted RBP14.31□□□□□ -0.12
USF1-211ENST00000534633 PLXNA4Q9HCM2 1894 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 M0QZ92 97 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 DGKIO75912 1065 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 FOSP01100 380 aaPredicted RBP14.31□□□□□ -0.12
USF1-211ENST00000534633 HMGB1P09429 215 aaKnown RBP14.31□□□□□ -0.12
USF1-211ENST00000534633 NAPAP54920 295 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 BTG3Q14201 252 aaPredicted RBP14.31□□□□□ -0.12
USF1-211ENST00000534633 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 APOA5Q6Q788 366 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 PLPPR4Q7Z2D5 763 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms