RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 SMAD3P84022 425 aaKnown RBP5.77□□□□□ -1.49
USH1C-210ENST00000534556 MGAT3Q09327 533 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 PTK7Q13308 1070 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 GRIN2CQ14957 1233 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 PLCB4Q15147 1175 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 INF2Q27J81 1249 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 BRDTQ58F21 947 aaPredicted RBP5.77□□□□□ -1.49
USH1C-210ENST00000534556 GPR153Q6NV75 609 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.77□□□□□ -1.49
USH1C-210ENST00000534556 LRRC8DQ7L1W4 858 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 NIPA1Q7RTP0 329 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 NLRX1Q86UT6 975 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 BLIDQ8IZY5 108 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 TMEM199Q8N511 208 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 C7orf31Q8N865 590 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 DAGLBQ8NCG7 672 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 TBCKQ8TEA7 893 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 SEPT1Q8WYJ6 367 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 ATP6V0A1Q93050 837 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 SEZ6LQ9BYH1 1024 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
USH1C-210ENST00000534556 SEMA6BQ9H3T3 888 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 CDHR5Q9HBB8 845 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 C6orf50Q9HD87 102 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 SH3GLB2Q9NR46 395 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 ORC3Q9UBD5 711 aaPredicted RBP5.77□□□□□ -1.49
USH1C-210ENST00000534556 SLC9A2Q9UBY0 812 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 PCDHA4Q9UN74 947 aa5.77□□□□□ -1.49
USH1C-210ENST00000534556 TDRD15B5MCY1 1934 aaKnown RBP5.77□□□□□ -1.49
USH1C-210ENST00000534556 EMSYQ7Z589 1322 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 STK36Q9NRP7 1315 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 CYP3A7-CYP3A51PA0A087WV96 503 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 C17orf102A2RUQ5 167 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 MBLAC1A4D2B0 266 aaPredicted RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 RFXAPO00287 272 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 EML1O00423 815 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 NOP56O00567 594 aaKnown RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 MAFGO15525 162 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 PSMD10O75832 226 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 CTSHP09668 335 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 SUPT20HL2P0C7V6 817 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 INSRRP14616 1297 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 SELPP16109 830 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 CYP3A7P24462 503 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 NLRP5P59047 1200 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 WDR5P61964 334 aaKnown RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 IGBP1P78318 339 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 GUCY1B3Q02153 619 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 ADGRE1Q14246 886 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 GRIK4Q16099 956 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 PRR16Q569H4 304 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 FAM26DQ5JW98 314 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 RTN4RL1Q86UN2 441 aaPredicted RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 CCDC83Q8IWF9 413 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 DBF4BQ8NFT6 615 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 ETNPPLQ8TBG4 499 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 AFAP1L1Q8TED9 768 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 LINC01599Q8WXQ3 324 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 MYLIPQ8WY64 445 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 HAS1Q92839 578 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 SLC5A5Q92911 643 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 CEP89Q96ST8 783 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 C22orf23Q9BZE7 217 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 NKX2-4Q9H2Z4 354 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 UNC45AQ9H3U1 944 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 AGO3Q9H9G7 860 aaKnown RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 JPH1Q9HDC5 661 aaPredicted RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 WRAP73Q9P2S5 460 aaPredicted RBP5.76□□□□□ -1.49
USH1C-210ENST00000534556 ANK1P16157 1881 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 NCOR1O75376 2440 aa5.76□□□□□ -1.49
USH1C-210ENST00000534556 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 BTBD18B2RXH4 712 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 KIF28PB7ZC32 967 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 CPLX1O14810 134 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 GNA11P29992 359 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 ZNF76P36508 570 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 THPOP40225 353 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 STAT5BP51692 787 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 USP11P51784 963 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 AKAP17AQ02040 695 aaKnown RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 SPIRE1Q08AE8 756 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 TMEM62Q0P6H9 643 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 PPFIA1Q13136 1202 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 BFSP2Q13515 415 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 LPIN1Q14693 890 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 Q4G0T1 1027 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 PLEKHG4Q58EX7 1191 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 KRT40Q6A162 431 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 SWSAP1Q6NVH7 229 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 PSRC1Q6PGN9 363 aaPredicted RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 TRMT1LQ7Z2T5 733 aaKnown RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 TEX2Q8IWB9 1127 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 TRIM22Q8IYM9 498 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 LINC01465Q8N7H1 131 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 ZNF579Q8NAF0 562 aaKnown RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 USP38Q8NB14 1042 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 GIMAP8Q8ND71 665 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms