RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 WNT7AO00755 349 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 TDP2O95551 362 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 RSPH10BP0C881 870 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 FDPSP14324 419 aaKnown RBP10.99□□□□□ -0.65
SSBP3-215ENST00000533946 PSMA5P28066 241 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 RCAN1P53805 252 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 MGAT3Q09327 533 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 ABHD15Q6UXT9 468 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 CCDC60Q8IWA6 550 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-215ENST00000533946 CAGE1Q8TC20 777 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 LINC01599Q8WXQ3 324 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 GLG1Q92896 1179 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 TM6SF1Q9BZW5 370 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 AGO3Q9H9G7 860 aaKnown RBP10.99□□□□□ -0.65
SSBP3-215ENST00000533946 JPH1Q9HDC5 661 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-215ENST00000533946 SLC9A2Q9UBY0 812 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 MTUS1Q9ULD2 1270 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 TTC28Q96AY4 2481 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 JAK2O60674 1132 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 LPXNO60711 386 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 ATG7O95352 703 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 CYP3A4P08684 503 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 PPFIA1Q13136 1202 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 LPIN1Q14693 890 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 UGCGQ16739 394 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 ME3Q16798 604 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 PRR16Q569H4 304 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 PLEKHG4Q58EX7 1191 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 PPP2R2DQ66LE6 453 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 RTN4RL1Q86UN2 441 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-215ENST00000533946 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
SSBP3-215ENST00000533946 ZNF668Q96K58 619 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-215ENST00000533946 KIF2CQ99661 725 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 SH2D3AQ9BRG2 576 aa10.98□□□□□ -0.65
SSBP3-215ENST00000533946 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-215ENST00000533946 FAM49AQ9H0Q0 323 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-215ENST00000533946 IGKV6D-21A0A0A0MT36 114 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 ESYT2A0FGR8 921 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 MBLAC1A4D2B0 266 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-215ENST00000533946 MSH4O15457 936 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 UPP2O95045 317 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 GHRP10912 638 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 IGFBP4P22692 258 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 RFC2P35250 354 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 ZNF76P36508 570 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 SWSAP1Q6NVH7 229 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 CNKSR3Q6P9H4 555 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 ARNTL2Q8WYA1 636 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 ZNF274Q96GC6 653 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-215ENST00000533946 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-215ENST00000533946 SLC28A3Q9HAS3 691 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 MSRAQ9UJ68 235 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 PCDHA11Q9Y5I1 949 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 ATG2AQ2TAZ0 1938 aa10.97□□□□□ -0.65
SSBP3-215ENST00000533946 BRWD1Q9NSI6 2320 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 MYH9P35579 1960 aaKnown RBP10.96□□□□□ -0.65
SSBP3-215ENST00000533946 TCF20Q9UGU0 1960 aaKnown RBP10.96□□□□□ -0.65
SSBP3-215ENST00000533946 NFASCO94856 1347 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 EMSYQ7Z589 1322 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
SSBP3-215ENST00000533946 DLL1O00548 723 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 SLC37A4O43826 429 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 ZNF862O60290 1169 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 PFKFB2O60825 505 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-215ENST00000533946 GATMP50440 423 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 STAT5BP51692 787 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 NLRP5P59047 1200 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 SSRP1Q08945 709 aaKnown RBP10.96□□□□□ -0.65
SSBP3-215ENST00000533946 AP3B2Q13367 1082 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 RAB30Q15771 203 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 TMEM266Q2M3C6 531 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 FAM26DQ5JW98 314 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.96□□□□□ -0.65
SSBP3-215ENST00000533946 TBCKQ8TEA7 893 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 GDPD5Q8WTR4 605 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 ZNF577Q9BSK1 485 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 SMARCAD1Q9H4L7 1026 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 EHMT1Q9H9B1 1298 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 C6orf50Q9HD87 102 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 TUBE1Q9UJT0 475 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 CDY2AQ9Y6F7 541 aa10.96□□□□□ -0.65
SSBP3-215ENST00000533946 BDP1A6H8Y1 2624 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 NRCAMQ92823 1304 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 CCDC196A0A1B0GTZ2 297 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 LINC01553A4QN01 128 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 CHMP2AO43633 222 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 TLL1O43897 1013 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 MGEA5O60502 916 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 STBD1O95210 358 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 GJB5O95377 273 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 PFKMP08237 780 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 ACTN1P12814 892 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms