RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TMTC3Q6ZXV5 915 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 LINC01599Q8WXQ3 324 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 GLG1Q92896 1179 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 PABPC5Q96DU9 382 aaKnown RBP20.7■□□□□ 0.9
UBXN1-216ENST00000533908 CDHR1Q96JP9 859 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 SMARCAD1Q9H4L7 1026 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 NSUN3Q9H649 340 aaKnown RBP20.7■□□□□ 0.9
UBXN1-216ENST00000533908 CDY2AQ9Y6F7 541 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 C5orf67F2Z3F1 127 aa20.69■□□□□ 0.9
UBXN1-216ENST00000533908 INSRRP14616 1297 aa20.69■□□□□ 0.9
UBXN1-216ENST00000533908 IGBP1P78318 339 aa20.69■□□□□ 0.9
UBXN1-216ENST00000533908 TYW1BQ6NUM6 668 aa20.69■□□□□ 0.9
UBXN1-216ENST00000533908 ZNF689Q96CS4 500 aaPredicted RBP20.69■□□□□ 0.9
UBXN1-216ENST00000533908 ESYT1Q9BSJ8 1104 aa20.69■□□□□ 0.9
UBXN1-216ENST00000533908 SLC12A7Q9Y666 1083 aa20.69■□□□□ 0.9
UBXN1-216ENST00000533908 POTEB3A0JP26 581 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 CALM1P0DP23 149 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 CALM2P0DP24 149 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 CALM3P0DP25 149 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 CTNNB1P35222 781 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 POTEBQ6S5H4 581 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 HEATR3Q7Z4Q2 680 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 CRIPAKQ8N1N5 446 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 KCNH7Q9NS40 1196 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 ATG2AQ2TAZ0 1938 aa20.68■□□□□ 0.9
UBXN1-216ENST00000533908 RALGAPA2Q2PPJ7 1873 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 TTC3P53804 2025 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 SPDYE3A6NKU9 549 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 MAFGO15525 162 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 DGKIO75912 1065 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 RB1P06400 928 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 ARP10275 920 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 CD52P31358 61 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 MRPS6P82932 125 aaKnown RBP20.67■□□□□ 0.9
UBXN1-216ENST00000533908 DLX2Q07687 328 aaPredicted RBP20.67■□□□□ 0.9
UBXN1-216ENST00000533908 CTC1Q2NKJ3 1217 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 WWC2Q6AWC2 1192 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 EP400NLQ6ZTU2 488 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 RSPH3Q86UC2 560 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 SGMS1Q86VZ5 419 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 TRAPPC12Q8WVT3 735 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 CLP1Q92989 425 aaKnown RBP20.67■□□□□ 0.9
UBXN1-216ENST00000533908 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 MXRA8Q9BRK3 442 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 FAM49AQ9H0Q0 323 aaPredicted RBP20.67■□□□□ 0.9
UBXN1-216ENST00000533908 ADGRA3Q8IWK6 1321 aa20.67■□□□□ 0.9
UBXN1-216ENST00000533908 SSTR3P32745 418 aaPredicted RBP20.66■□□□□ 0.9
UBXN1-216ENST00000533908 GTF2F1P35269 517 aaKnown RBP eCLIP20.66■□□□□ 0.9
UBXN1-216ENST00000533908 TMEM62Q0P6H9 643 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 FUT2Q10981 343 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 HYAL1Q12794 435 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 CAMK1Q14012 370 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 PUS10Q3MIT2 529 aaKnown RBP20.66■□□□□ 0.9
UBXN1-216ENST00000533908 TSHZ1Q6ZSZ6 1077 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 MICU3Q86XE3 530 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 CLDND1Q9NY35 253 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 SLC9A2Q9UBY0 812 aa20.66■□□□□ 0.9
UBXN1-216ENST00000533908 ARIH1Q9Y4X5 557 aaPredicted RBP20.66■□□□□ 0.9
UBXN1-216ENST00000533908 RRN3P2A6NIE6 340 aa20.65■□□□□ 0.9
UBXN1-216ENST00000533908 HOXD11P31277 338 aaPredicted RBP20.65■□□□□ 0.9
UBXN1-216ENST00000533908 ACTR2P61160 394 aa20.65■□□□□ 0.9
UBXN1-216ENST00000533908 ITGB3BPQ13352 177 aaPredicted RBP20.65■□□□□ 0.9
UBXN1-216ENST00000533908 BTG3Q14201 252 aaPredicted RBP20.65■□□□□ 0.9
UBXN1-216ENST00000533908 PLCB4Q15147 1175 aa20.65■□□□□ 0.9
UBXN1-216ENST00000533908 SKAP1Q86WV1 359 aa20.65■□□□□ 0.9
UBXN1-216ENST00000533908 JPH1Q9HDC5 661 aaPredicted RBP20.65■□□□□ 0.9
UBXN1-216ENST00000533908 BRPF3Q9ULD4 1205 aa20.65■□□□□ 0.9
UBXN1-216ENST00000533908 CNTNAP5Q8WYK1 1306 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 ZP2Q05996 745 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 TCEANC2Q96MN5 208 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 C11orf84Q9BUA3 381 aaPredicted RBP20.64■□□□□ 0.89
UBXN1-216ENST00000533908 LMAN2LQ9H0V9 348 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
UBXN1-216ENST00000533908 TMEM260Q9NX78 707 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 PADI3Q9ULW8 664 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 HCN4Q9Y3Q4 1203 aa20.64■□□□□ 0.89
UBXN1-216ENST00000533908 C19orf67A6NJJ6 358 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 DNAJB1P25685 340 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 EXOSC10Q01780 885 aaKnown RBP20.63■□□□□ 0.89
UBXN1-216ENST00000533908 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 PLPPR4Q7Z2D5 763 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 TMX1Q9H3N1 280 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 AGO4Q9HCK5 861 aaKnown RBP20.63■□□□□ 0.89
UBXN1-216ENST00000533908 RIC8AQ9NPQ8 531 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 ANO2Q9NQ90 1003 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 PLAGL2Q9UPG8 496 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 PCDHA2Q9Y5H9 948 aa20.63■□□□□ 0.89
UBXN1-216ENST00000533908 MRPL42Q9Y6G3 142 aaKnown RBP20.63■□□□□ 0.89
UBXN1-216ENST00000533908 V9GY48 417 aaPredicted RBP20.63■□□□□ 0.89
UBXN1-216ENST00000533908 NFASCO94856 1347 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 LINC01565O15544 149 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 CSPG5O95196 566 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 ATG7O95352 703 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 CCNE2O96020 404 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 GATMP50440 423 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 STAT5BP51692 787 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 CLUL1Q15846 466 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 IER5Q5VY09 327 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 CELF4Q9BZC1 486 aaKnown RBP20.62■□□□□ 0.89
UBXN1-216ENST00000533908 AZI2Q9H6S1 392 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms